+ case "${usergroup_phase}" in + local run_cmd + run_cmd=run_su + shift + run_su /opt/pkg/bin/bmake all BATCH=1 DEPENDS_TARGET=/nonexistent WRKLOG=/tmp/bulklog/vsearch-2.29.0/work.log + su pbulk -c '"$@"' make /opt/pkg/bin/bmake all BATCH=1 DEPENDS_TARGET=/nonexistent WRKLOG=/tmp/bulklog/vsearch-2.29.0/work.log ===> Building for vsearch-2.29.0 /opt/pkg/bin/gmake all-recursive gmake[1]: Entering directory '/home/pbulk/build/biology/vsearch/work/vsearch-2.29.0' Making all in src gmake[2]: Entering directory '/home/pbulk/build/biology/vsearch/work/vsearch-2.29.0/src' depbase=`echo align_simd.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ g++ -DHAVE_CONFIG_H -I. -I.. -I/opt/pkg/include -Wall -Wextra -Wpedantic -march=x86-64 -mtune=generic -DNDEBUG -std=c++11 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -MT align_simd.o -MD -MP -MF $depbase.Tpo -c -o align_simd.o align_simd.cc &&\ mv -f $depbase.Tpo $depbase.Po depbase=`echo allpairs.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ g++ -DHAVE_CONFIG_H -I. -I.. -I/opt/pkg/include -Wall -Wextra -Wpedantic -march=x86-64 -mtune=generic -DNDEBUG -std=c++11 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -MT allpairs.o -MD -MP -MF $depbase.Tpo -c -o allpairs.o allpairs.cc &&\ mv -f $depbase.Tpo $depbase.Po depbase=`echo arch.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ g++ -DHAVE_CONFIG_H -I. -I.. -I/opt/pkg/include -Wall -Wextra -Wpedantic -march=x86-64 -mtune=generic -DNDEBUG -std=c++11 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -MT arch.o -MD -MP -MF $depbase.Tpo -c -o arch.o arch.cc &&\ mv -f $depbase.Tpo $depbase.Po depbase=`echo attributes.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ g++ -DHAVE_CONFIG_H -I. -I.. -I/opt/pkg/include -Wall -Wextra -Wpedantic -march=x86-64 -mtune=generic -DNDEBUG -std=c++11 -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -MT attributes.o -MD -MP -MF $depbase.Tpo -c -o attributes.o attributes.cc &&\ mv -f $depbase.Tpo $depbase.Po In file included from allpairs.cc:61: vsearch.h:189:10: fatal error: byteswap.h: No such file or directory 189 | #include <byteswap.h> | ^~~~~~~~~~~~ compilation terminated. gmake[2]: *** [Makefile:777: allpairs.o] Error 1 gmake[2]: *** Waiting for unfinished jobs.... In file included from attributes.cc:61: vsearch.h:189:10: fatal error: byteswap.h: No such file or directory 189 | #include <byteswap.h> | ^~~~~~~~~~~~ compilation terminated. In file included from arch.cc:61: vsearch.h:189:10: fatal error: byteswap.h: No such file or directory 189 | #include <byteswap.h> | ^~~~~~~~~~~~ compilation terminated. In file included from align_simd.cc:61: vsearch.h:189:10: fatal error: byteswap.h: No such file or directory 189 | #include <byteswap.h> | ^~~~~~~~~~~~ compilation terminated. gmake[2]: *** [Makefile:777: arch.o] Error 1 gmake[2]: *** [Makefile:777: attributes.o] Error 1 gmake[2]: *** [Makefile:777: align_simd.o] Error 1 gmake[2]: Leaving directory '/home/pbulk/build/biology/vsearch/work/vsearch-2.29.0/src' gmake[1]: *** [Makefile:376: all-recursive] Error 1 gmake[1]: Leaving directory '/home/pbulk/build/biology/vsearch/work/vsearch-2.29.0' gmake: *** [Makefile:317: all] Error 2 *** Error code 2 Stop. bmake[1]: stopped making "all" in /data/jenkins/workspace/pkgsrc-upstream-trunk/biology/vsearch *** Error code 1 Stop. bmake: stopped making "all" in /data/jenkins/workspace/pkgsrc-upstream-trunk/biology/vsearch