+ case "${usergroup_phase}" in + local run_cmd + run_cmd=run_su + shift + run_su /opt/pkg/bin/bmake all BATCH=1 DEPENDS_TARGET=/nonexistent WRKLOG=/tmp/bulklog/fasda-0.1.5/work.log + su pbulk -c '"$@"' make /opt/pkg/bin/bmake all BATCH=1 DEPENDS_TARGET=/nonexistent WRKLOG=/tmp/bulklog/fasda-0.1.5/work.log ===> Building for fasda-0.1.5 cd /home/pbulk/build/biology/fasda/work/fasda-0.1.5 && make depend PREFIX=/opt/pkg rm -f Makefile.depend for file in *.c; do gcc -isystem /opt/pkg/include -isystem /opt/pkg/include -MM ${file} >> Makefile.depend; printf "\t\${CC} -c \${CFLAGS} ${file}\n\n" >> Makefile.depend; done --- fasda.o --- --- alignment-stats-mutators.o --- --- abundance.o --- --- normalize.o --- --- fasda.o --- gcc -c -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -DLIBEXECDIR=\"/opt/pkg/libexec/fasda\" -DVERSION=\"`./version.sh`\" -isystem /opt/pkg/include -isystem /opt/pkg/include fasda.c --- alignment-stats-mutators.o --- gcc -c -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -DLIBEXECDIR=\"/opt/pkg/libexec/fasda\" -DVERSION=\"`./version.sh`\" -isystem /opt/pkg/include -isystem /opt/pkg/include alignment-stats-mutators.c --- abundance.o --- gcc -c -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -DLIBEXECDIR=\"/opt/pkg/libexec/fasda\" -DVERSION=\"`./version.sh`\" -isystem /opt/pkg/include -isystem /opt/pkg/include abundance.c --- normalize.o --- gcc -c -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -DLIBEXECDIR=\"/opt/pkg/libexec/fasda\" -DVERSION=\"`./version.sh`\" -isystem /opt/pkg/include -isystem /opt/pkg/include normalize.c --- fold-change.o --- --- mann-whitney.o --- --- fold-change.o --- gcc -c -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -DLIBEXECDIR=\"/opt/pkg/libexec/fasda\" -DVERSION=\"`./version.sh`\" -isystem /opt/pkg/include -isystem /opt/pkg/include fold-change.c --- mann-whitney.o --- gcc -c -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -DLIBEXECDIR=\"/opt/pkg/libexec/fasda\" -DVERSION=\"`./version.sh`\" -isystem /opt/pkg/include -isystem /opt/pkg/include mann-whitney.c --- exact-p-val.o --- gcc -c -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -DLIBEXECDIR=\"/opt/pkg/libexec/fasda\" -DVERSION=\"`./version.sh`\" -isystem /opt/pkg/include -isystem /opt/pkg/include exact-p-val.c --- pval-sim.o --- gcc -c -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -DLIBEXECDIR=\"/opt/pkg/libexec/fasda\" -DVERSION=\"`./version.sh`\" -isystem /opt/pkg/include -isystem /opt/pkg/include pval-sim.c --- fasda --- gcc -o fasda fasda.o alignment-stats-mutators.o -lresolv -L/opt/pkg/lib -Wl,-R/opt/pkg/lib -L/opt/pkg/lib -Wl,-rpath,/opt/pkg/lib -L/opt/pkg/lib -Wl,-rpath,/opt/pkg/lib -lbiolibc -lxtend -lm --- fc-ge.o --- gcc -c -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -I/opt/pkg/include -DLIBEXECDIR=\"/opt/pkg/libexec/fasda\" -DVERSION=\"`./version.sh`\" -isystem /opt/pkg/include -isystem /opt/pkg/include fc-ge.c --- normalize --- gcc -o normalize normalize.o -lresolv -L/opt/pkg/lib -Wl,-R/opt/pkg/lib -L/opt/pkg/lib -Wl,-rpath,/opt/pkg/lib -L/opt/pkg/lib -Wl,-rpath,/opt/pkg/lib -lbiolibc -lxtend -lm --- abundance --- gcc -o abundance abundance.o -lresolv -L/opt/pkg/lib -Wl,-R/opt/pkg/lib -L/opt/pkg/lib -Wl,-rpath,/opt/pkg/lib -L/opt/pkg/lib -Wl,-rpath,/opt/pkg/lib -lbiolibc -lxtend -lm --- fold-change --- --- pval-sim --- --- fold-change --- gcc -o fold-change fold-change.o mann-whitney.o exact-p-val.o fc-ge.o -lresolv -L/opt/pkg/lib -Wl,-R/opt/pkg/lib -L/opt/pkg/lib -Wl,-rpath,/opt/pkg/lib -L/opt/pkg/lib -Wl,-rpath,/opt/pkg/lib -lbiolibc -lxtend -lm --- pval-sim --- gcc -o pval-sim pval-sim.o fc-ge.o mann-whitney.o exact-p-val.o -lresolv -L/opt/pkg/lib -Wl,-R/opt/pkg/lib -L/opt/pkg/lib -Wl,-rpath,/opt/pkg/lib -L/opt/pkg/lib -Wl,-rpath,/opt/pkg/lib -lbiolibc -lxtend -lm