+ case "${usergroup_phase}" in + local run_cmd + run_cmd=run_su + shift + run_su /opt/pkg/bin/bmake configure BATCH=1 DEPENDS_TARGET=/nonexistent WRKLOG=/tmp/bulklog/R-igraph-1.6.0/work.log + su pbulk -c '"$@"' make /opt/pkg/bin/bmake configure BATCH=1 DEPENDS_TARGET=/nonexistent WRKLOG=/tmp/bulklog/R-igraph-1.6.0/work.log => Bootstrap dependency digest>=20211023: found digest-20220214 => Checksum BLAKE2s OK for R/igraph_1.6.0.tar.gz => Checksum SHA512 OK for R/igraph_1.6.0.tar.gz ===> Installing dependencies for R-igraph-1.6.0 ========================================================================== The following variables will affect the build process of this package, R-igraph-1.6.0. Their current value is shown below: * PKGSRC_BLAS_TYPES = netlib openblas openblas_pthread openblas_openmp Based on these variables, the following variables have been set: * BLAS_INCLUDES (not defined) * BLAS_LIBS = -lblas * BLAS_PC = blas * BLAS_TYPE = netlib * CBLAS_LIBS (not defined) * CBLAS_PC (not defined) * LAPACKE_LIBS (not defined) * LAPACKE_PC (not defined) * LAPACK_LIBS = -llapack -lblas * LAPACK_PC = lapack You may want to abort the process now with CTRL-C and change the value of variables in the first group before continuing. Be sure to run `/opt/pkg/bin/bmake clean' after the changes. ========================================================================== => Tool dependency mktools-[0-9]*: found mktools-20220614 => Tool dependency cwrappers>=20150314: found cwrappers-20220403 => Tool dependency checkperms>=1.1: found checkperms-1.12 => Full dependency R-cli-[0-9]*: found R-cli-3.6.2 => Full dependency R-lifecycle-[0-9]*: found R-lifecycle-1.0.4 => Full dependency R-magrittr>=1.5: found R-magrittr-2.0.3 => Full dependency R-pkgconfig>=2.0.0: found R-pkgconfig-2.0.3 => Full dependency R-rlang-[0-9]*: found R-rlang-1.1.3 => Full dependency libxml2>=2.10.4nb3: found libxml2-2.12.4 => Full dependency R-cpp11>=0.4.2: found R-cpp11-0.4.7 => Full dependency R>=4.2.0nb1: found R-4.3.2nb1 ===> Overriding tools for R-igraph-1.6.0 ===> Extracting for R-igraph-1.6.0 ===> Patching for R-igraph-1.6.0 => Applying pkgsrc patches for R-igraph-1.6.0 => Verifying /data/jenkins/workspace/pkgsrc-upstream-trunk/math/R-igraph/patches/patch-src_vendor_plfit_hzeta.c => Applying pkgsrc patch /data/jenkins/workspace/pkgsrc-upstream-trunk/math/R-igraph/patches/patch-src_vendor_plfit_hzeta.c Hmm... Looks like a unified diff to me... The text leading up to this was: -------------------------- |$NetBSD: patch-src_vendor_plfit_hzeta.c,v 1.2 2022/05/03 00:24:20 mef Exp $ | |/* tweak the macro, not found in NetBSD as of 9.99.96 */ |/* corrected by tnn. thanks */ | |--- src/vendor/plfit/hzeta.c.orig 2022-04-20 01:23:25.000000000 +0900 |+++ src/vendor/plfit/hzeta.c 2022-04-29 00:33:15.125029161 +0900 -------------------------- Patching file src/vendor/plfit/hzeta.c using Plan A... Hunk #1 succeeded at 64. done ===> Creating toolchain wrappers for R-igraph-1.6.0 ===> Configuring for R-igraph-1.6.0 => Checking for portability problems in extracted files