+ case "${usergroup_phase}" in
+ local run_cmd
+ run_cmd=run_su
+ shift
+ run_su /opt/pkg/bin/bmake all BATCH=1 DEPENDS_TARGET=/nonexistent WRKLOG=/tmp/bulklog/vcf2hap-0.1.6/work.log
+ su pbulk -c '"$@"' make /opt/pkg/bin/bmake all BATCH=1 DEPENDS_TARGET=/nonexistent WRKLOG=/tmp/bulklog/vcf2hap-0.1.6/work.log
=> Bootstrap dependency digest>=20211023: found digest-20220214
===> Building for vcf2hap-0.1.6
cd /home/pbulk/build/biology/vcf2hap/work/vcf2hap-0.1.6 && /opt/pkg/bin/bmake PREFIX=/opt/pkg depend
rm -f Makefile.depend
for file in *.c; do  gcc -isystem /opt/pkg/include -isystem /opt/pkg/include -MM ${file} >> Makefile.depend;  printf "\t\${CC} -c \${CFLAGS} ${file}\n\n" >> Makefile.depend;  done
gcc -c -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -D_FORTIFY_SOURCE=2 -I/opt/pkg/include -DVERSION=\"`./version.sh`\" -isystem /opt/pkg/include -isystem /opt/pkg/include vcf2hap.c
gcc -o vcf2hap vcf2hap.o -L/opt/pkg/lib -Wl,-R/opt/pkg/lib -L{PREFIX}/lib -L/opt/pkg/lib -lbiolibc -lxtend
Undefined			first referenced
 symbol  			    in file
herror                              /home/pbulk/build/biology/vcf2hap/work/.buildlink/lib/libxtend.so
gethostbyname                       /home/pbulk/build/biology/vcf2hap/work/.buildlink/lib/libxtend.so
ld: fatal: symbol referencing errors. No output written to vcf2hap
collect2: error: ld returned 1 exit status
*** [vcf2hap] Error code 1

bmake: stopped in /home/pbulk/build/biology/vcf2hap/work/vcf2hap-0.1.6
1 error

bmake: stopped in /home/pbulk/build/biology/vcf2hap/work/vcf2hap-0.1.6
*** Error code 2

Stop.
bmake[1]: stopped in /data/jenkins/workspace/pkgsrc-upstream-trunk/biology/vcf2hap
*** Error code 1

Stop.
bmake: stopped in /data/jenkins/workspace/pkgsrc-upstream-trunk/biology/vcf2hap