+ case "${usergroup_phase}" in
+ local run_cmd
+ run_cmd=run_su
+ shift
+ run_su /opt/pkg/bin/bmake all BATCH=1 DEPENDS_TARGET=/nonexistent WRKLOG=/tmp/bulklog/fasda-0.1.2/work.log
+ su pbulk -c '"$@"' make /opt/pkg/bin/bmake all BATCH=1 DEPENDS_TARGET=/nonexistent WRKLOG=/tmp/bulklog/fasda-0.1.2/work.log
=> Bootstrap dependency digest>=20211023: found digest-20220214
===> Building for fasda-0.1.2
cd /home/pbulk/build/biology/fasda/work/fasda-0.1.2 && make depend PREFIX=/opt/pkg
rm -f Makefile.depend
for file in *.c; do  gcc -isystem /opt/pkg/include -isystem /opt/pkg/include -MM ${file} >> Makefile.depend;  printf "\t\${CC} -c \${CFLAGS} ${file}\n\n" >> Makefile.depend;  done
gcc -c -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -D_FORTIFY_SOURCE=2 -I/opt/pkg/include -DLIBEXECDIR=\"/opt/pkg/libexec/fasda\" -DVERSION=\"`./version.sh`\" -isystem /opt/pkg/include -isystem /opt/pkg/include fasda.c
gcc -c -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -D_FORTIFY_SOURCE=2 -I/opt/pkg/include -DLIBEXECDIR=\"/opt/pkg/libexec/fasda\" -DVERSION=\"`./version.sh`\" -isystem /opt/pkg/include -isystem /opt/pkg/include alignment-stats-mutators.c
gcc -c -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -D_FORTIFY_SOURCE=2 -I/opt/pkg/include -DLIBEXECDIR=\"/opt/pkg/libexec/fasda\" -DVERSION=\"`./version.sh`\" -isystem /opt/pkg/include -isystem /opt/pkg/include abundance.c
gcc -c -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -D_FORTIFY_SOURCE=2 -I/opt/pkg/include -DLIBEXECDIR=\"/opt/pkg/libexec/fasda\" -DVERSION=\"`./version.sh`\" -isystem /opt/pkg/include -isystem /opt/pkg/include normalize.c
gcc -c -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -D_FORTIFY_SOURCE=2 -I/opt/pkg/include -DLIBEXECDIR=\"/opt/pkg/libexec/fasda\" -DVERSION=\"`./version.sh`\" -isystem /opt/pkg/include -isystem /opt/pkg/include fold-change.c
fold-change.c: In function 'agreement':
fold-change.c:352:18: warning: implicit declaration of function 'MAX' [-Wimplicit-function-declaration]
  352 |     return 100 * MAX(c1_higher, c2_higher) / r;
      |                  ^~~
gcc -c -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -D_FORTIFY_SOURCE=2 -I/opt/pkg/include -DLIBEXECDIR=\"/opt/pkg/libexec/fasda\" -DVERSION=\"`./version.sh`\" -isystem /opt/pkg/include -isystem /opt/pkg/include mann-whitney.c
gcc -c -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -D_FORTIFY_SOURCE=2 -I/opt/pkg/include -DLIBEXECDIR=\"/opt/pkg/libexec/fasda\" -DVERSION=\"`./version.sh`\" -isystem /opt/pkg/include -isystem /opt/pkg/include exact-p-val.c
gcc -c -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -D_FORTIFY_SOURCE=2 -I/opt/pkg/include -DLIBEXECDIR=\"/opt/pkg/libexec/fasda\" -DVERSION=\"`./version.sh`\" -isystem /opt/pkg/include -isystem /opt/pkg/include pval-sim.c
gcc -o fasda fasda.o alignment-stats-mutators.o -lresolv -L/opt/pkg/lib -Wl,-R/opt/pkg/lib -L/opt/pkg/lib -Wl,-rpath,/opt/pkg/lib  -L/opt/pkg/lib -Wl,-rpath,/opt/pkg/lib  -lbiolibc -lxtend -lm
gcc -o abundance abundance.o -lresolv -L/opt/pkg/lib -Wl,-R/opt/pkg/lib -L/opt/pkg/lib -Wl,-rpath,/opt/pkg/lib  -L/opt/pkg/lib -Wl,-rpath,/opt/pkg/lib  -lbiolibc -lxtend -lm
gcc -o normalize normalize.o -lresolv -L/opt/pkg/lib -Wl,-R/opt/pkg/lib -L/opt/pkg/lib -Wl,-rpath,/opt/pkg/lib  -L/opt/pkg/lib -Wl,-rpath,/opt/pkg/lib  -lbiolibc -lxtend -lm
gcc -c -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -D_FORTIFY_SOURCE=2 -I/opt/pkg/include -DLIBEXECDIR=\"/opt/pkg/libexec/fasda\" -DVERSION=\"`./version.sh`\" -isystem /opt/pkg/include -isystem /opt/pkg/include fc-ge.c
gcc -o fold-change fold-change.o mann-whitney.o exact-p-val.o fc-ge.o -lresolv -L/opt/pkg/lib -Wl,-R/opt/pkg/lib -L/opt/pkg/lib -Wl,-rpath,/opt/pkg/lib  -L/opt/pkg/lib -Wl,-rpath,/opt/pkg/lib  -lbiolibc -lxtend -lm
Undefined			first referenced
 symbol  			    in file
MAX                                 fold-change.o
ld: fatal: symbol referencing errors. No output written to fold-change
collect2: error: ld returned 1 exit status
*** [fold-change] Error code 1

bmake: stopped in /home/pbulk/build/biology/fasda/work/fasda-0.1.2
1 error

bmake: stopped in /home/pbulk/build/biology/fasda/work/fasda-0.1.2
*** Error code 2

Stop.
bmake[1]: stopped in /data/jenkins/workspace/pkgsrc-upstream-trunk/biology/fasda
*** Error code 1

Stop.
bmake: stopped in /data/jenkins/workspace/pkgsrc-upstream-trunk/biology/fasda