+ case "${usergroup_phase}" in + local run_cmd + run_cmd=run_su + shift + run_su /opt/pkg/bin/bmake all BATCH=1 DEPENDS_TARGET=/nonexistent WRKLOG=/tmp/bulklog/plinkseq-0.08nb6/work.log + su pbulk -c '"$@"' make /opt/pkg/bin/bmake all BATCH=1 DEPENDS_TARGET=/nonexistent WRKLOG=/tmp/bulklog/plinkseq-0.08nb6/work.log => Bootstrap dependency digest>=20211023: found digest-20220214 ===> Building for plinkseq-0.08nb6 cd /home/pbulk/build/biology/plinkseq/work/plinkseq-0.08/lib && protoc --cpp_out=. pp.proto && mv pp.pb.cc pp.pb.cpp [libprotobuf WARNING google/protobuf/compiler/parser.cc:646] No syntax specified for the proto file: pp.proto. Please use 'syntax = "proto2";' or 'syntax = "proto3";' to specify a syntax version. (Defaulted to proto2 syntax.) cd /home/pbulk/build/biology/plinkseq/work/plinkseq-0.08/lib && protoc --cpp_out=. variant.proto && mv variant.pb.cc variant.pb.cpp [libprotobuf WARNING google/protobuf/compiler/parser.cc:646] No syntax specified for the proto file: variant.proto. Please use 'syntax = "proto2";' or 'syntax = "proto3";' to specify a syntax version. (Defaulted to proto2 syntax.) /opt/pkg/bin/bmake all-recursive Making all in lib /usr/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I.. -I/opt/pkg/include -pipe -O2 -msave-args -fno-aggressive-loop-optimizations -D_FORTIFY_SOURCE=2 -I/opt/pkg/include -MT libplinkseq_la-eval.lo -MD -MP -MF .deps/libplinkseq_la-eval.Tpo -c -o libplinkseq_la-eval.lo `test -f 'eval.cpp' || echo './'`eval.cpp /opt/pkg/bin/libtool: line 979: /opt/pkg/bin/nbsed: No such file or directory /opt/pkg/bin/libtool: line 2970: /opt/pkg/bin/nbsed: No such file or directory /opt/pkg/bin/libtool: line 1434: /opt/pkg/bin/nbsed: No such file or directory /opt/pkg/bin/libtool: line 1330: /opt/pkg/bin/nbsed: No such file or directory : error: Failed to create '.libs' *** [libplinkseq_la-eval.lo] Error code 1 bmake[2]: stopped in /home/pbulk/build/biology/plinkseq/work/plinkseq-0.08/lib 1 error bmake[2]: stopped in /home/pbulk/build/biology/plinkseq/work/plinkseq-0.08/lib *** [all-recursive] Error code 1 bmake[1]: stopped in /home/pbulk/build/biology/plinkseq/work/plinkseq-0.08 1 error bmake[1]: stopped in /home/pbulk/build/biology/plinkseq/work/plinkseq-0.08 *** [all] Error code 2 bmake: stopped in /home/pbulk/build/biology/plinkseq/work/plinkseq-0.08 1 error bmake: stopped in /home/pbulk/build/biology/plinkseq/work/plinkseq-0.08 *** Error code 2 Stop. bmake[1]: stopped in /data/jenkins/workspace/pkgsrc-upstream-trunk/biology/plinkseq *** Error code 1 Stop. bmake: stopped in /data/jenkins/workspace/pkgsrc-upstream-trunk/biology/plinkseq