+ case "${usergroup_phase}" in + local run_cmd + run_cmd=run_su + shift + run_su /opt/local/bin/bmake all BATCH=1 DEPENDS_TARGET=/nonexistent PYTHON_VERSION_REQD=311 WRKLOG=/tmp/bulklog/py311-tables-3.7.0nb2/work.log + su pbulk -c '"$@"' make /opt/local/bin/bmake all BATCH=1 DEPENDS_TARGET=/nonexistent PYTHON_VERSION_REQD=311 WRKLOG=/tmp/bulklog/py311-tables-3.7.0nb2/work.log => Bootstrap dependency digest>=20211023: found digest-20220214 ===> Building for py311-tables-3.7.0nb2 (cd /home/pbulk/build/math/py-tables/work/tables-3.7.0/ && /usr/bin/env USETOOLS=no PTHREAD_CFLAGS=\ -pthread\ PTHREAD_LDFLAGS=\ -pthread PTHREAD_LIBS=-lpthread\ -lrt PTHREADBASE=/usr DL_CFLAGS= DL_LDFLAGS= DL_LIBS= NPY_BLAS_LIBS=-lblas NPY_LAPACK_LIBS=-llapack\ -lblas NPY_CBLAS_LIBS=-lcblas\ -lblas PYTHON=/opt/local/bin/python3.11 CC=gcc CFLAGS=-pipe\ -O2\ -msave-args\ -fno-aggressive-loop-optimizations\ -I/opt/local/include\ -I/usr/include\ -I/opt/local/include/python3.11 CPPFLAGS=-I/opt/local/include/netlib\ -I/opt/local/include\ -I/usr/include\ -I/opt/local/include/python3.11 CXX=g++ CXXFLAGS=-pipe\ -O2\ -msave-args\ -fno-aggressive-loop-optimizations\ -I/opt/local/include\ -I/usr/include\ -I/opt/local/include/python3.11 COMPILER_RPATH_FLAG=-Wl,-R F77=gfortran FC=gfortran FFLAGS=-O LANG=C LC_ALL=C LC_COLLATE=C LC_CTYPE=C LC_MESSAGES=C LC_MONETARY=C LC_NUMERIC=C LC_TIME=C LDFLAGS=-L/opt/local/gcc12/lib/gcc/x86_64-sun-solaris2.11/12.2.0\ -Wl,-R/opt/local/gcc12/lib/gcc/x86_64-sun-solaris2.11/12.2.0\ -L/opt/local/lib\ -Wl,-R/opt/local/lib\ -L/usr/lib/amd64\ -Wl,-R/usr/lib/amd64\ -lintl\ -liconv LINKER_RPATH_FLAG=-R PATH=/home/pbulk/build/math/py-tables/work/.cwrapper/bin:/home/pbulk/build/math/py-tables/work/.buildlink/bin:/home/pbulk/build/math/py-tables/work/.gcc/bin:/home/pbulk/build/math/py-tables/work/.tools/bin:/opt/local/bin:/sbin:/usr/sbin:/usr/bin:/opt/tools/bin:/opt/local/bin:/opt/local/bin PREFIX=/opt/local MAKELEVEL=0 CONFIG_SITE= PKG_SYSCONFDIR=/opt/local/etc HOME=/home/pbulk/build/math/py-tables/work/.home CWRAPPERS_CONFIG_DIR=/home/pbulk/build/math/py-tables/work/.cwrapper/config CPP=cpp LOCALBASE=/opt/local X11BASE=/opt/local PKGMANDIR=man PKGINFODIR=info PKGGNUDIR= MAKECONF=/dev/null OBJECT_FMT=ELF USETOOLS=no BSD_INSTALL_PROGRAM=/opt/local/bin/bsdinstall\ -c\ \ -o\ pbulk\ -g\ pbulk\ -m\ 755 BSD_INSTALL_SCRIPT=/opt/local/bin/bsdinstall\ -c\ -o\ pbulk\ -g\ pbulk\ -m\ 755 BSD_INSTALL_LIB=/opt/local/bin/bsdinstall\ -c\ -o\ pbulk\ -g\ pbulk\ -m\ 755 BSD_INSTALL_DATA=/opt/local/bin/bsdinstall\ -c\ -o\ pbulk\ -g\ pbulk\ -m\ 644 BSD_INSTALL_MAN=/opt/local/bin/bsdinstall\ -c\ -o\ pbulk\ -g\ pbulk\ -m\ 644 BSD_INSTALL=/opt/local/bin/bsdinstall BSD_INSTALL_PROGRAM_DIR=/opt/local/bin/bsdinstall\ -d\ -o\ pbulk\ -g\ pbulk\ -m\ 755 BSD_INSTALL_SCRIPT_DIR=/opt/local/bin/bsdinstall\ -d\ -o\ pbulk\ -g\ pbulk\ -m\ 755 BSD_INSTALL_LIB_DIR=/opt/local/bin/bsdinstall\ -d\ -o\ pbulk\ -g\ pbulk\ -m\ 755 BSD_INSTALL_DATA_DIR=/opt/local/bin/bsdinstall\ -d\ -o\ pbulk\ -g\ pbulk\ -m\ 755 BSD_INSTALL_MAN_DIR=/opt/local/bin/bsdinstall\ -d\ -o\ pbulk\ -g\ pbulk\ -m\ 755 BSD_INSTALL_GAME=/opt/local/bin/bsdinstall\ -c\ \ -o\ pbulk\ -g\ pbulk\ -m\ 2555 BSD_INSTALL_GAME_DATA=/opt/local/bin/bsdinstall\ -c\ -o\ pbulk\ -g\ pbulk\ -m\ 664 BSD_INSTALL_GAME_DIR=/opt/local/bin/bsdinstall\ -d\ -o\ pbulk\ -g\ pbulk\ -m\ 775 INSTALL_INFO= MAKEINFO=/home/pbulk/build/math/py-tables/work/.tools/bin/makeinfo FLEX= BISON= ITSTOOL=/home/pbulk/build/math/py-tables/work/.tools/bin/itstool GDBUS_CODEGEN=/home/pbulk/build/math/py-tables/work/.tools/bin/gdbus-codegen PKG_CONFIG=/home/pbulk/build/math/py-tables/work/.tools/bin/pkg-config PKG_CONFIG_LIBDIR=/home/pbulk/build/math/py-tables/work/.buildlink/lib/amd64/pkgconfig:/home/pbulk/build/math/py-tables/work/.buildlink/lib/pkgconfig:/home/pbulk/build/math/py-tables/work/.buildlink/share/pkgconfig PKG_CONFIG_LOG=/home/pbulk/build/math/py-tables/work/.pkg-config.log PKG_CONFIG_PATH= CWRAPPERS_CONFIG_DIR=/home/pbulk/build/math/py-tables/work/.cwrapper/config /opt/local/bin/python3.11 setup.py build --blosc=/opt/local --bzip2=/opt/local --hdf5=/opt/local --lzo=/opt/local -j1) /home/pbulk/build/math/py-tables/work/tables-3.7.0/setup.py:18: DeprecationWarning: pkg_resources is deprecated as an API. See https://setuptools.pypa.io/en/latest/pkg_resources.html import pkg_resources Error compiling Cython file: ------------------------------------------------------------ ... def _dump_h5_backtrace(): cdef object bt = [] if H5Ewalk(H5E_DEFAULT, H5E_WALK_DOWNWARD, e_walk_cb, bt) < 0: ^ ------------------------------------------------------------ tables/utilsextension.pyx:387:47: Cannot assign type 'herr_t (unsigned int, const H5E_error_t *, void *) except? -1 nogil' to 'H5E_walk_t'. Exception values are incompatible. Suggest adding 'noexcept' to type 'herr_t (unsigned int, const H5E_error_t *, void *) except? -1 nogil'. * Using Python 3.11.6 (main, Nov 22 2023, 02:56:22) [GCC 12.2.0] * Found cython 3.0.5 * USE_PKGCONFIG: True * Found HDF5 headers at ``/opt/local/include``, library at ``/opt/local/lib``. * Found LZO 2 headers at ``/opt/local/include``, library at ``/opt/local/lib``. * Skipping detection of LZO 1 since LZO 2 has already been found. * Found bzip2 headers at ``/opt/local/include``, library at ``/opt/local/lib``. * Found blosc headers at ``/opt/local/include``, library at ``/opt/local/lib``. Compiling tables/utilsextension.pyx because it changed. [1/1] Cythonizing tables/utilsextension.pyx Traceback (most recent call last): File "/home/pbulk/build/math/py-tables/work/tables-3.7.0/setup.py", line 834, in cython_extfiles = get_cython_extfiles(cython_extnames) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/home/pbulk/build/math/py-tables/work/tables-3.7.0/setup.py", line 829, in get_cython_extfiles cythonize(str(extpfile), language_level="2") File "/opt/local/lib/python3.11/site-packages/Cython/Build/Dependencies.py", line 1154, in cythonize cythonize_one(*args) File "/opt/local/lib/python3.11/site-packages/Cython/Build/Dependencies.py", line 1321, in cythonize_one raise CompileError(None, pyx_file) Cython.Compiler.Errors.CompileError: tables/utilsextension.pyx *** Error code 1 Stop. bmake[1]: stopped in /data/jenkins/workspace/pkgsrc-trunk-x86_64/math/py-tables *** Error code 1 Stop. bmake: stopped in /data/jenkins/workspace/pkgsrc-trunk-x86_64/math/py-tables