+ case "${usergroup_phase}" in + local run_cmd + run_cmd=run_su + shift + run_su /usr/pkg/bin/bmake all BATCH=1 DEPENDS_TARGET=/nonexistent WRKLOG=/tmp/bulklog/mpqc-2.3.1nb12/work.log + su pbulk -c '"$@"' make /usr/pkg/bin/bmake all BATCH=1 DEPENDS_TARGET=/nonexistent WRKLOG=/tmp/bulklog/mpqc-2.3.1nb12/work.log => Bootstrap dependency digest>=20211023: found digest-20220214 WARNING: [license.mk] Every package should define a LICENSE. ===> Building for mpqc-2.3.1nb12 for dir in lib bin src; \ do \ (cd ${dir} && /bin/make ) || exit 1; \ done make[1]: Entering directory '/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/lib' for dir in basis elisp perl; \ do \ (cd ${dir} && /bin/make ) || exit 1; \ done make[2]: Entering directory '/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/lib/basis' make[2]: Nothing to be done for 'default'. make[2]: Leaving directory '/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/lib/basis' make[2]: Entering directory '/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/lib/elisp' make[2]: Nothing to be done for 'default'. make[2]: Leaving directory '/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/lib/elisp' make[2]: Entering directory '/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/lib/perl' make[2]: Nothing to be done for 'default'. make[2]: Leaving directory '/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/lib/perl' make[1]: Leaving directory '/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/lib' make[1]: Entering directory '/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/bin' make[1]: Nothing to be done for 'default'. make[1]: Leaving directory '/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/bin' make[1]: Entering directory '/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src' for dir in lib bin; \ do \ (cd ${dir} && /bin/make ) || exit 1; \ done make[2]: Entering directory '/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib' for dir in util math chemistry; \ do \ (cd ${dir} && /bin/make ) || exit 1; \ done make[3]: Entering directory '/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib/util' for dir in options ref container class state misc keyval group render; \ do \ (cd ${dir} && /bin/make ) || exit 1; \ done make[4]: Entering directory '/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib/util/options' c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O GetLongOpt.cc | sed 's/^GetLongOpt.o/GetLongOpt.o GetLongOpt.d/g' > GetLongOpt.d c++ -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O -c GetLongOpt.cc -o GetLongOpt.o /bin/rm -f ../../../../lib/libSCoptions.a ar r ../../../../lib/libSCoptions.a GetLongOpt.o ar: creating ../../../../lib/libSCoptions.a ranlib ../../../../lib/libSCoptions.a make[4]: Leaving directory '/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib/util/options' make[4]: Entering directory '/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib/util/ref' c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O reftestx.cc | sed 's/^reftestx.o/reftestx.o reftestx.d/g' > reftestx.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O reftest.cc | sed 's/^reftest.o/reftest.o reftest.d/g' > reftest.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O identity.cc | sed 's/^identity.o/identity.o identity.d/g' > identity.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O ref.cc | sed 's/^ref.o/ref.o ref.d/g' > ref.d c++ -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O -c ref.cc -o ref.o c++ -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O -c identity.cc -o identity.o /bin/rm -f ../../../../lib/libSCref.a ar r ../../../../lib/libSCref.a ref.o identity.o ar: creating ../../../../lib/libSCref.a ranlib ../../../../lib/libSCref.a make[4]: Leaving directory '/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib/util/ref' make[4]: Entering directory '/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib/util/container' c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O carray.cc | sed 's/^carray.o/carray.o carray.d/g' > carray.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O bitarray.cc | sed 's/^bitarray.o/bitarray.o bitarray.d/g' > bitarray.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O avl.cc | sed 's/^avl.o/avl.o avl.d/g' > avl.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O avltest.cc | sed 's/^avltest.o/avltest.o avltest.d/g' > avltest.d c++ -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O -c avl.cc -o avl.o c++ -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O -c bitarray.cc -o bitarray.o c++ -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O -c carray.cc -o carray.o /bin/rm -f ../../../../lib/libSCcontainer.a ar r ../../../../lib/libSCcontainer.a avl.o bitarray.o carray.o ar: creating ../../../../lib/libSCcontainer.a ranlib ../../../../lib/libSCcontainer.a make[4]: Leaving directory '/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib/util/container' make[4]: Entering directory '/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib/util/class' c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O scexception.cc | sed 's/^scexception.o/scexception.o scexception.d/g' > scexception.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O class.cc | sed 's/^class.o/class.o class.d/g' > class.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O scextest.cc | sed 's/^scextest.o/scextest.o scextest.d/g' > scextest.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O classtest.cc | sed 's/^classtest.o/classtest.o classtest.d/g' > classtest.d c++ -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O -c class.cc -o class.o c++ -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O -c scexception.cc -o scexception.o /bin/rm -f ../../../../lib/libSCclass.a ar r ../../../../lib/libSCclass.a class.o scexception.o ar: creating ../../../../lib/libSCclass.a ranlib ../../../../lib/libSCclass.a make[4]: Leaving directory '/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib/util/class' make[4]: Entering directory '/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib/util/state' c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O statetest.cc | sed 's/^statetest.o/statetest.o statetest.d/g' > statetest.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O tmplinst.cc | sed 's/^tmplinst.o/tmplinst.o tmplinst.d/g' > tmplinst.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O translate.cc | sed 's/^translate.o/translate.o translate.d/g' > translate.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O state_file.cc | sed 's/^state_file.o/state_file.o state_file.d/g' > state_file.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O state_text.cc | sed 's/^state_text.o/state_text.o state_text.d/g' > state_text.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O proxy.cc | sed 's/^proxy.o/proxy.o proxy.d/g' > proxy.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O state_bin.cc | sed 's/^state_bin.o/state_bin.o state_bin.d/g' > state_bin.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O stateout.cc | sed 's/^stateout.o/stateout.o stateout.d/g' > stateout.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O statein.cc | sed 's/^statein.o/statein.o statein.d/g' > statein.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O state.cc | sed 's/^state.o/state.o state.d/g' > state.d c++ -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O -c state.cc -o state.o c++ -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O -c statein.cc -o statein.o c++ -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O -c stateout.cc -o stateout.o c++ -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O -c state_bin.cc -o state_bin.o c++ -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O -c proxy.cc -o proxy.o c++ -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O -c state_text.cc -o state_text.o c++ -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O -c state_file.cc -o state_file.o c++ -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O -c translate.cc -o translate.o c++ -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O -c tmplinst.cc -o tmplinst.o /bin/rm -f ../../../../lib/libSCstate.a ar r ../../../../lib/libSCstate.a state.o statein.o stateout.o state_bin.o proxy.o state_text.o state_file.o translate.o tmplinst.o ar: creating ../../../../lib/libSCstate.a ranlib ../../../../lib/libSCstate.a make[4]: Leaving directory '/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib/util/state' make[4]: Entering directory '/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib/util/misc' c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O autovectest.cc | sed 's/^autovectest.o/autovectest.o autovectest.d/g' > autovectest.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O unittest.cc | sed 's/^unittest.o/unittest.o unittest.d/g' > unittest.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O tregtime.cc | sed 's/^tregtime.o/tregtime.o tregtime.d/g' > tregtime.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O bugtest.cc | sed 's/^bugtest.o/bugtest.o bugtest.d/g' > bugtest.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O formiot.cc | sed 's/^formiot.o/formiot.o formiot.d/g' > formiot.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O comptest.cc | sed 's/^comptest.o/comptest.o comptest.d/g' > comptest.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O ieee.cc | sed 's/^ieee.o/ieee.o ieee.d/g' > ieee.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O units.cc | sed 's/^units.o/units.o units.d/g' > units.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O exenv.cc | sed 's/^exenv.o/exenv.o exenv.d/g' > exenv.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O regtime.cc | sed 's/^regtime.o/regtime.o regtime.d/g' > regtime.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O bug.cc | sed 's/^bug.o/bug.o bug.d/g' > bug.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O formio.cc | sed 's/^formio.o/formio.o formio.d/g' > formio.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O compute.cc | sed 's/^compute.o/compute.o compute.d/g' > compute.d c++ -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O -c compute.cc -o compute.o c++ -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O -c formio.cc -o formio.o c++ -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O -c bug.cc -o bug.o c++ -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O -c regtime.cc -o regtime.o bug.cc: In member function 'virtual void sc::Debugger::debug(const char*)': bug.cc:389:13: warning: ignoring return value of 'int system(const char*)' declared with attribute 'warn_unused_result' [-Wunused-result] 389 | system(cmd); | ~~~~~~^~~~~ c++ -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O -c exenv.cc -o exenv.o c++ -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O -c units.cc -o units.o c++ -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O -c ieee.cc -o ieee.o /bin/rm -f ../../../../lib/libSCmisc.a ar r ../../../../lib/libSCmisc.a compute.o formio.o bug.o regtime.o exenv.o units.o ieee.o ar: creating ../../../../lib/libSCmisc.a ranlib ../../../../lib/libSCmisc.a make[4]: Leaving directory '/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib/util/misc' make[4]: Entering directory '/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib/util/keyval' c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O keyvaltest.cc | sed 's/^keyvaltest.o/keyvaltest.o keyvaltest.d/g' > keyvaltest.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O ipv2_scan.cc | sed 's/^ipv2_scan.o/ipv2_scan.o ipv2_scan.d/g' > ipv2_scan.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O ipv2_parse.cc | sed 's/^ipv2_parse.o/ipv2_parse.o ipv2_parse.d/g' > ipv2_parse.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O keyvalpre.cc | sed 's/^keyvalpre.o/keyvalpre.o keyvalpre.d/g' > keyvalpre.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O keyvalagg.cc | sed 's/^keyvalagg.o/keyvalagg.o keyvalagg.d/g' > keyvalagg.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O keyvalstr.cc | sed 's/^keyvalstr.o/keyvalstr.o keyvalstr.d/g' > keyvalstr.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O keyvalass.cc | sed 's/^keyvalass.o/keyvalass.o keyvalass.d/g' > keyvalass.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O keyvalval.cc | sed 's/^keyvalval.o/keyvalval.o keyvalval.d/g' > keyvalval.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O keyvalipv2.cc | sed 's/^keyvalipv2.o/keyvalipv2.o keyvalipv2.d/g' > keyvalipv2.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O keyval.cc | sed 's/^keyval.o/keyval.o keyval.d/g' > keyval.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O ipv2_read.cc | sed 's/^ipv2_read.o/ipv2_read.o ipv2_read.d/g' > ipv2_read.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O ipv2_print.cc | sed 's/^ipv2_print.o/ipv2_print.o ipv2_print.d/g' > ipv2_print.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O ipv2_karray.cc | sed 's/^ipv2_karray.o/ipv2_karray.o ipv2_karray.d/g' > ipv2_karray.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O ipv2_error.cc | sed 's/^ipv2_error.o/ipv2_error.o ipv2_error.d/g' > ipv2_error.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O ipv2_data.cc | sed 's/^ipv2_data.o/ipv2_data.o ipv2_data.d/g' > ipv2_data.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O ipv2_cwk.cc | sed 's/^ipv2_cwk.o/ipv2_cwk.o ipv2_cwk.d/g' > ipv2_cwk.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O ipv2_alloc.cc | sed 's/^ipv2_alloc.o/ipv2_alloc.o ipv2_alloc.d/g' > ipv2_alloc.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O ipv2.cc | sed 's/^ipv2.o/ipv2.o ipv2.d/g' > ipv2.d c++ -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O -c ipv2.cc -o ipv2.o c++ -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O -c ipv2_alloc.cc -o ipv2_alloc.o c++ -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O -c ipv2_cwk.cc -o ipv2_cwk.o c++ -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O -c ipv2_data.cc -o ipv2_data.o c++ -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O -c ipv2_error.cc -o ipv2_error.o c++ -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O -c ipv2_karray.cc -o ipv2_karray.o c++ -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O -c ipv2_print.cc -o ipv2_print.o c++ -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O -c ipv2_read.cc -o ipv2_read.o c++ -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O -c keyval.cc -o keyval.o c++ -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O -c keyvalipv2.cc -o keyvalipv2.o c++ -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O -c keyvalval.cc -o keyvalval.o c++ -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O -c keyvalass.cc -o keyvalass.o c++ -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O -c keyvalstr.cc -o keyvalstr.o c++ -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O -c keyvalagg.cc -o keyvalagg.o c++ -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O -c keyvalpre.cc -o keyvalpre.o c++ -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O -c ipv2_parse.cc -o ipv2_parse.o ipv2_parse.tmp.cc: In member function 'int sc::IPV2::yparse()': ipv2_parse.tmp.cc:869:16: warning: ISO C++17 does not allow 'register' storage class specifier [-Wregister] ipv2_parse.tmp.cc:870:16: warning: ISO C++17 does not allow 'register' storage class specifier [-Wregister] ipv2_parse.tmp.cc:888:19: warning: ISO C++17 does not allow 'register' storage class specifier [-Wregister] ipv2_parse.tmp.cc:893:21: warning: ISO C++17 does not allow 'register' storage class specifier [-Wregister] c++ -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O -c ipv2_scan.cc -o ipv2_scan.o : In member function 'virtual int IPV2FlexLexer::yylex()': :559:25: warning: ISO C++17 does not allow 'register' storage class specifier [-Wregister] :560:17: warning: ISO C++17 does not allow 'register' storage class specifier [-Wregister] :560:25: warning: ISO C++17 does not allow 'register' storage class specifier [-Wregister] :561:15: warning: ISO C++17 does not allow 'register' storage class specifier [-Wregister] :605:21: warning: ISO C++17 does not allow 'register' storage class specifier [-Wregister] : In member function 'int IPV2FlexLexer::yy_get_next_buffer()': :963:21: warning: ISO C++17 does not allow 'register' storage class specifier [-Wregister] :964:17: warning: ISO C++17 does not allow 'register' storage class specifier [-Wregister] :965:15: warning: ISO C++17 does not allow 'register' storage class specifier [-Wregister] :965:31: warning: ISO C++17 does not allow 'register' storage class specifier [-Wregister] : In member function 'yy_state_type IPV2FlexLexer::yy_get_previous_state()': :1089:25: warning: ISO C++17 does not allow 'register' storage class specifier [-Wregister] :1090:17: warning: ISO C++17 does not allow 'register' storage class specifier [-Wregister] :1096:20: warning: ISO C++17 does not allow 'register' storage class specifier [-Wregister] : In member function 'yy_state_type IPV2FlexLexer::yy_try_NUL_trans(yy_state_type)': :1121:15: warning: ISO C++17 does not allow 'register' storage class specifier [-Wregister] :1122:21: warning: ISO C++17 does not allow 'register' storage class specifier [-Wregister] :1124:19: warning: ISO C++17 does not allow 'register' storage class specifier [-Wregister] : At global scope: :1142:54: warning: ISO C++17 does not allow 'register' storage class specifier [-Wregister] : In member function 'void IPV2FlexLexer::yyunput(int, char*)': :1144:17: warning: ISO C++17 does not allow 'register' storage class specifier [-Wregister] :1154:16: warning: ISO C++17 does not allow 'register' storage class specifier [-Wregister] :1155:18: warning: ISO C++17 does not allow 'register' storage class specifier [-Wregister] :1157:18: warning: ISO C++17 does not allow 'register' storage class specifier [-Wregister] /bin/rm -f ../../../../lib/libSCkeyval.a ar r ../../../../lib/libSCkeyval.a ipv2.o ipv2_alloc.o ipv2_cwk.o ipv2_data.o ipv2_error.o ipv2_karray.o ipv2_print.o ipv2_read.o keyval.o keyvalipv2.o keyvalval.o keyvalass.o keyvalstr.o keyvalagg.o keyvalpre.o ipv2_parse.o ipv2_scan.o ar: creating ../../../../lib/libSCkeyval.a ranlib ../../../../lib/libSCkeyval.a make[4]: Leaving directory '/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib/util/keyval' make[4]: Entering directory '/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib/util/group' c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O thpthd.cc | sed 's/^thpthd.o/thpthd.o thpthd.d/g' > thpthd.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O globcnt.cc | sed 's/^globcnt.o/globcnt.o globcnt.d/g' > globcnt.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O memshm.cc | sed 's/^memshm.o/memshm.o memshm.d/g' > memshm.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O messshm.cc | sed 's/^messshm.o/messshm.o messshm.d/g' > messshm.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O memrdma.cc | sed 's/^memrdma.o/memrdma.o memrdma.d/g' > memrdma.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O memiter.cc | sed 's/^memiter.o/memiter.o memiter.d/g' > memiter.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O thread.cc | sed 's/^thread.o/thread.o thread.d/g' > thread.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O pregtime.cc | sed 's/^pregtime.o/pregtime.o pregtime.d/g' > pregtime.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O memproc.cc | sed 's/^memproc.o/memproc.o memproc.d/g' > memproc.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O memamsg.cc | sed 's/^memamsg.o/memamsg.o memamsg.d/g' > memamsg.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O pool.cc | sed 's/^pool.o/pool.o pool.d/g' > pool.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O memmsg.cc | sed 's/^memmsg.o/memmsg.o memmsg.d/g' > memmsg.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O memory.cc | sed 's/^memory.o/memory.o memory.d/g' > memory.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O rnglock.cc | sed 's/^rnglock.o/rnglock.o rnglock.d/g' > rnglock.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O hcube.cc | sed 's/^hcube.o/hcube.o hcube.d/g' > hcube.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O topology.cc | sed 's/^topology.o/topology.o topology.d/g' > topology.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O reduce.cc | sed 's/^reduce.o/reduce.o reduce.d/g' > reduce.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O messint.cc | sed 's/^messint.o/messint.o messint.d/g' > messint.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O messproc.cc | sed 's/^messproc.o/messproc.o messproc.d/g' > messproc.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O messimpl.cc | sed 's/^messimpl.o/messimpl.o messimpl.d/g' > messimpl.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O message.cc | sed 's/^message.o/message.o message.d/g' > message.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O mstate.cc | sed 's/^mstate.o/mstate.o mstate.d/g' > mstate.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O prttest.cc | sed 's/^prttest.o/prttest.o prttest.d/g' > prttest.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O thrtest.cc | sed 's/^thrtest.o/thrtest.o thrtest.d/g' > thrtest.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O rnglocktest.cc | sed 's/^rnglocktest.o/rnglocktest.o rnglocktest.d/g' > rnglocktest.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O messtest.cc | sed 's/^messtest.o/messtest.o messtest.d/g' > messtest.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O pooltest.cc | sed 's/^pooltest.o/pooltest.o pooltest.d/g' > pooltest.d c++ -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O -c mstate.cc -o mstate.o c++ -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O -c message.cc -o message.o c++ -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O -c messimpl.cc -o messimpl.o c++ -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O -c messproc.cc -o messproc.o c++ -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O -c messint.cc -o messint.o c++ -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O -c reduce.cc -o reduce.o c++ -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O -c topology.cc -o topology.o c++ -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O -c hcube.cc -o hcube.o c++ -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O -c rnglock.cc -o rnglock.o c++ -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O -c memory.cc -o memory.o c++ -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O -c memmsg.cc -o memmsg.o c++ -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O -c pool.cc -o pool.o c++ -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O -c memamsg.cc -o memamsg.o c++ -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O -c memproc.cc -o memproc.o c++ -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O -c pregtime.cc -o pregtime.o c++ -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O -c thread.cc -o thread.o c++ -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O -c memiter.cc -o memiter.o c++ -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O -c memrdma.cc -o memrdma.o c++ -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O -c messshm.cc -o messshm.o c++ -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O -c memshm.cc -o memshm.o c++ -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O -c globcnt.cc -o globcnt.o c++ -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O -c thpthd.cc -o thpthd.o /bin/rm -f ../../../../lib/libSCgroup.a ar r ../../../../lib/libSCgroup.a mstate.o message.o messimpl.o messproc.o messint.o reduce.o topology.o hcube.o rnglock.o memory.o memmsg.o pool.o memamsg.o memproc.o pregtime.o thread.o memiter.o memrdma.o messshm.o memshm.o globcnt.o thpthd.o ar: creating ../../../../lib/libSCgroup.a ranlib ../../../../lib/libSCgroup.a make[4]: Leaving directory '/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib/util/group' make[4]: Entering directory '/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib/util/render' c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O rentest.cc | sed 's/^rentest.o/rentest.o rentest.d/g' > rentest.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O animate.cc | sed 's/^animate.o/animate.o animate.d/g' > animate.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O tempinst.cc | sed 's/^tempinst.o/tempinst.o tempinst.d/g' > tempinst.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O polylines.cc | sed 's/^polylines.o/polylines.o polylines.d/g' > polylines.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O color.cc | sed 's/^color.o/color.o color.d/g' > color.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O algebra3.cc | sed 's/^algebra3.o/algebra3.o algebra3.d/g' > algebra3.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O sphere.cc | sed 's/^sphere.o/sphere.o sphere.d/g' > sphere.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O material.cc | sed 's/^material.o/material.o material.d/g' > material.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O appearance.cc | sed 's/^appearance.o/appearance.o appearance.d/g' > appearance.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O transform.cc | sed 's/^transform.o/transform.o transform.d/g' > transform.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O polysphere.cc | sed 's/^polysphere.o/polysphere.o polysphere.d/g' > polysphere.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O polygons.cc | sed 's/^polygons.o/polygons.o polygons.d/g' > polygons.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O object.cc | sed 's/^object.o/object.o object.d/g' > object.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O oogl.cc | sed 's/^oogl.o/oogl.o oogl.d/g' > oogl.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O render.cc | sed 's/^render.o/render.o render.d/g' > render.d c++ -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O -c render.cc -o render.o c++ -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O -c oogl.cc -o oogl.o c++ -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O -c object.cc -o object.o c++ -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O -c polygons.cc -o polygons.o c++ -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O -c polysphere.cc -o polysphere.o c++ -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O -c transform.cc -o transform.o c++ -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O -c appearance.cc -o appearance.o c++ -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O -c material.cc -o material.o c++ -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O -c sphere.cc -o sphere.o c++ -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O -c algebra3.cc -o algebra3.o c++ -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O -c color.cc -o color.o c++ -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O -c polylines.cc -o polylines.o c++ -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O -c tempinst.cc -o tempinst.o c++ -DHAVE_CONFIG_H -D_REENTRANT -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O -c animate.cc -o animate.o /bin/rm -f ../../../../lib/libSCrender.a ar r ../../../../lib/libSCrender.a render.o oogl.o object.o polygons.o polysphere.o transform.o appearance.o material.o sphere.o algebra3.o color.o polylines.o tempinst.o animate.o ar: creating ../../../../lib/libSCrender.a ranlib ../../../../lib/libSCrender.a make[4]: Leaving directory '/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib/util/render' make[3]: Leaving directory '/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib/util' make[3]: Entering directory '/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib/math' for dir in scmat optimize isosurf symmetry; \ do \ (cd ${dir} && /bin/make ) || exit 1; \ done make[4]: Entering directory '/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib/math/scmat' c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -DSRCDIR=\"/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib/math/scmat\" -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O blockedtest.cc | sed 's/^blockedtest.o/blockedtest.o blockedtest.d/g' > blockedtest.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -DSRCDIR=\"/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib/math/scmat\" -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O repltest.cc | sed 's/^repltest.o/repltest.o repltest.d/g' > repltest.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -DSRCDIR=\"/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib/math/scmat\" -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O localtest.cc | sed 's/^localtest.o/localtest.o localtest.d/g' > localtest.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -DSRCDIR=\"/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib/math/scmat\" -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O disttest.cc | sed 's/^disttest.o/disttest.o disttest.d/g' > disttest.d cc -M -c -DHAVE_CONFIG_H -D_REENTRANT -DSRCDIR=\"/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib/math/scmat\" -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O svd.c | sed 's/^svd.o/svd.o svd.d/g' > svd.d cc -M -c -DHAVE_CONFIG_H -D_REENTRANT -DSRCDIR=\"/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib/math/scmat\" -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O cmatrix.c | sed 's/^cmatrix.o/cmatrix.o cmatrix.d/g' > cmatrix.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -DSRCDIR=\"/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib/math/scmat\" -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O util.cc | sed 's/^util.o/util.o util.d/g' > util.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -DSRCDIR=\"/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib/math/scmat\" -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O vector3_i.cc | sed 's/^vector3_i.o/vector3_i.o vector3_i.d/g' > vector3_i.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -DSRCDIR=\"/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib/math/scmat\" -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O vector3.cc | sed 's/^vector3.o/vector3.o vector3.d/g' > vector3.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -DSRCDIR=\"/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib/math/scmat\" -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O matrix3.cc | sed 's/^matrix3.o/matrix3.o matrix3.d/g' > matrix3.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -DSRCDIR=\"/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib/math/scmat\" -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O blockedsymm.cc | sed 's/^blockedsymm.o/blockedsymm.o blockedsymm.d/g' > blockedsymm.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -DSRCDIR=\"/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib/math/scmat\" -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O blockeddiag.cc | sed 's/^blockeddiag.o/blockeddiag.o blockeddiag.d/g' > blockeddiag.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -DSRCDIR=\"/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib/math/scmat\" -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O blockedrect.cc | sed 's/^blockedrect.o/blockedrect.o blockedrect.d/g' > blockedrect.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -DSRCDIR=\"/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib/math/scmat\" -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O blockedvect.cc | sed 's/^blockedvect.o/blockedvect.o blockedvect.d/g' > blockedvect.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -DSRCDIR=\"/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib/math/scmat\" -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O blocked.cc | sed 's/^blocked.o/blocked.o blocked.d/g' > blocked.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -DSRCDIR=\"/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib/math/scmat\" -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O replvect.cc | sed 's/^replvect.o/replvect.o replvect.d/g' > replvect.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -DSRCDIR=\"/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib/math/scmat\" -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O replsymm.cc | sed 's/^replsymm.o/replsymm.o replsymm.d/g' > replsymm.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -DSRCDIR=\"/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib/math/scmat\" -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O repldiag.cc | sed 's/^repldiag.o/repldiag.o repldiag.d/g' > repldiag.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -DSRCDIR=\"/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib/math/scmat\" -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O replrect.cc | sed 's/^replrect.o/replrect.o replrect.d/g' > replrect.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -DSRCDIR=\"/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib/math/scmat\" -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O repl.cc | sed 's/^repl.o/repl.o repl.d/g' > repl.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -DSRCDIR=\"/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib/math/scmat\" -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O distvect.cc | sed 's/^distvect.o/distvect.o distvect.d/g' > distvect.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -DSRCDIR=\"/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib/math/scmat\" -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O distsymm.cc | sed 's/^distsymm.o/distsymm.o distsymm.d/g' > distsymm.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -DSRCDIR=\"/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib/math/scmat\" -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O distdiag.cc | sed 's/^distdiag.o/distdiag.o distdiag.d/g' > distdiag.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -DSRCDIR=\"/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib/math/scmat\" -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O distrect.cc | sed 's/^distrect.o/distrect.o distrect.d/g' > distrect.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -DSRCDIR=\"/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib/math/scmat\" -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O dist.cc | sed 's/^dist.o/dist.o dist.d/g' > dist.d /usr/pkg/bin/perl ../../../../bin/mkf77sym.pl f77sym.in f77sym.h c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -DSRCDIR=\"/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib/math/scmat\" -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O localvect.cc | sed 's/^localvect.o/localvect.o localvect.d/g' > localvect.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -DSRCDIR=\"/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib/math/scmat\" -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O localsymm.cc | sed 's/^localsymm.o/localsymm.o localsymm.d/g' > localsymm.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -DSRCDIR=\"/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib/math/scmat\" -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O localdiag.cc | sed 's/^localdiag.o/localdiag.o localdiag.d/g' > localdiag.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -DSRCDIR=\"/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib/math/scmat\" -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O localrect.cc | sed 's/^localrect.o/localrect.o localrect.d/g' > localrect.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -DSRCDIR=\"/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib/math/scmat\" -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O local.cc | sed 's/^local.o/local.o local.d/g' > local.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -DSRCDIR=\"/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib/math/scmat\" -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O result.cc | sed 's/^result.o/result.o result.d/g' > result.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -DSRCDIR=\"/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib/math/scmat\" -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O elemop.cc | sed 's/^elemop.o/elemop.o elemop.d/g' > elemop.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -DSRCDIR=\"/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib/math/scmat\" -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O blkiter.cc | sed 's/^blkiter.o/blkiter.o blkiter.d/g' > blkiter.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -DSRCDIR=\"/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib/math/scmat\" -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O block.cc | sed 's/^block.o/block.o block.d/g' > block.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -DSRCDIR=\"/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib/math/scmat\" -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O matrix_i.cc | sed 's/^matrix_i.o/matrix_i.o matrix_i.d/g' > matrix_i.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -DSRCDIR=\"/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib/math/scmat\" -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O matrix.cc | sed 's/^matrix.o/matrix.o matrix.d/g' > matrix.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -DSRCDIR=\"/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib/math/scmat\" -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O abstract.cc | sed 's/^abstract.o/abstract.o abstract.d/g' > abstract.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -DSRCDIR=\"/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib/math/scmat\" -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O dim.cc | sed 's/^dim.o/dim.o dim.d/g' > dim.d c++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -DSRCDIR=\"/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib/math/scmat\" -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O disthql.cc | sed 's/^disthql.o/disthql.o disthql.d/g' > disthql.d c++ -DHAVE_CONFIG_H -D_REENTRANT -DSRCDIR=\"/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib/math/scmat\" -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O -c dim.cc -o dim.o c++ -DHAVE_CONFIG_H -D_REENTRANT -DSRCDIR=\"/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib/math/scmat\" -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O -c abstract.cc -o abstract.o c++ -DHAVE_CONFIG_H -D_REENTRANT -DSRCDIR=\"/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib/math/scmat\" -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O -c matrix.cc -o matrix.o c++ -DHAVE_CONFIG_H -D_REENTRANT -DSRCDIR=\"/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib/math/scmat\" -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O -c matrix_i.cc -o matrix_i.o c++ -DHAVE_CONFIG_H -D_REENTRANT -DSRCDIR=\"/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib/math/scmat\" -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O -c block.cc -o block.o c++ -DHAVE_CONFIG_H -D_REENTRANT -DSRCDIR=\"/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib/math/scmat\" -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O -c blkiter.cc -o blkiter.o c++ -DHAVE_CONFIG_H -D_REENTRANT -DSRCDIR=\"/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib/math/scmat\" -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O -c elemop.cc -o elemop.o c++ -DHAVE_CONFIG_H -D_REENTRANT -DSRCDIR=\"/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib/math/scmat\" -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O -c result.cc -o result.o c++ -DHAVE_CONFIG_H -D_REENTRANT -DSRCDIR=\"/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib/math/scmat\" -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O -c local.cc -o local.o c++ -DHAVE_CONFIG_H -D_REENTRANT -DSRCDIR=\"/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib/math/scmat\" -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O -c localrect.cc -o localrect.o c++ -DHAVE_CONFIG_H -D_REENTRANT -DSRCDIR=\"/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib/math/scmat\" -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O -c localdiag.cc -o localdiag.o c++ -DHAVE_CONFIG_H -D_REENTRANT -DSRCDIR=\"/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib/math/scmat\" -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O -c localsymm.cc -o localsymm.o c++ -DHAVE_CONFIG_H -D_REENTRANT -DSRCDIR=\"/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib/math/scmat\" -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O -c localvect.cc -o localvect.o In file included from localsymm.cc:37: ../../../../src/lib/math/scmat/mops.h: In function 'void mult_block(double**, double**, double**, int, int, int)': ../../../../src/lib/math/scmat/mops.h:131:25: warning: ISO C++17 does not allow 'register' storage class specifier [-Wregister] 131 | register double b0=bt[kk], b1=bt[kk+1]; | ^~ ../../../../src/lib/math/scmat/mops.h:131:36: warning: ISO C++17 does not allow 'register' storage class specifier [-Wregister] 131 | register double b0=bt[kk], b1=bt[kk+1]; | ^~ c++ -DHAVE_CONFIG_H -D_REENTRANT -DSRCDIR=\"/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib/math/scmat\" -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O -c disthql.cc -o disthql.o c++ -DHAVE_CONFIG_H -D_REENTRANT -DSRCDIR=\"/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib/math/scmat\" -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O -c dist.cc -o dist.o c++ -DHAVE_CONFIG_H -D_REENTRANT -DSRCDIR=\"/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib/math/scmat\" -I../../../../src/lib -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/include -I/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib -I/usr/include -I/usr/pkg/include -O -c distrect.cc -o distrect.o /tmp/ccvWud2d.s: Assembler messages: /tmp/ccvWud2d.s: Fatal error: can't write 21 bytes to section .text of dist.o: 'No space left on device' as: BFD version 2.35.2-54.el9 assertion fail ../../bfd/elf.c:3177 as: BFD version 2.35.2-54.el9 assertion fail ../../bfd/elf.c:3177 as: BFD version 2.35.2-54.el9 assertion fail ../../bfd/elf.c:3177 as: BFD version 2.35.2-54.el9 assertion fail ../../bfd/elf.c:3177 as: BFD version 2.35.2-54.el9 assertion fail ../../bfd/elf.c:3177 as: BFD version 2.35.2-54.el9 assertion fail ../../bfd/elf.c:3177 as: BFD version 2.35.2-54.el9 assertion fail ../../bfd/elf.c:3177 as: BFD version 2.35.2-54.el9 assertion fail ../../bfd/elf.c:3177 as: BFD version 2.35.2-54.el9 assertion fail ../../bfd/elf.c:3177 as: BFD version 2.35.2-54.el9 assertion fail ../../bfd/elf.c:3177 as: BFD version 2.35.2-54.el9 assertion fail ../../bfd/elf.c:3177 as: BFD version 2.35.2-54.el9 assertion fail ../../bfd/elf.c:3177 as: BFD version 2.35.2-54.el9 assertion fail ../../bfd/elf.c:3177 as: BFD version 2.35.2-54.el9 assertion fail ../../bfd/elf.c:3177 as: BFD version 2.35.2-54.el9 assertion fail ../../bfd/elf.c:3177 as: BFD version 2.35.2-54.el9 assertion fail ../../bfd/elf.c:3177 as: BFD version 2.35.2-54.el9 assertion fail ../../bfd/elf.c:3177 as: BFD version 2.35.2-54.el9 assertion fail ../../bfd/elf.c:3177 as: BFD version 2.35.2-54.el9 assertion fail ../../bfd/elf.c:3177 as: BFD version 2.35.2-54.el9 assertion fail ../../bfd/elf.c:3177 as: BFD version 2.35.2-54.el9 assertion fail ../../bfd/elf.c:3177 as: BFD version 2.35.2-54.el9 assertion fail ../../bfd/elf.c:3177 as: BFD version 2.35.2-54.el9 assertion fail ../../bfd/elf.c:3177 as: BFD version 2.35.2-54.el9 assertion fail ../../bfd/elf.c:3177 as: BFD version 2.35.2-54.el9 assertion fail ../../bfd/elf.c:3177 as: BFD version 2.35.2-54.el9 assertion fail ../../bfd/elf.c:3177 as: BFD version 2.35.2-54.el9 assertion fail ../../bfd/elf.c:3177 as: BFD version 2.35.2-54.el9 assertion fail ../../bfd/elf.c:3177 as: BFD version 2.35.2-54.el9 assertion fail ../../bfd/elf.c:3177 as: BFD version 2.35.2-54.el9 assertion fail ../../bfd/elf.c:3177 make[4]: *** [/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib/math/scmat/../../../../lib/GlobalRules:169: dist.o] Error 1 make[4]: *** Waiting for unfinished jobs.... distrect.cc:950:1: fatal error: error writing to /tmp/ccutN6DU.s: No space left on device 950 | } | ^ compilation terminated. make[4]: *** [/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib/math/scmat/../../../../lib/GlobalRules:169: distrect.o] Error 1 make[4]: Leaving directory '/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib/math/scmat' make[3]: *** [/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib/math/../../../lib/GlobalSubDirs:5: default] Error 1 make[3]: Leaving directory '/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib/math' make[2]: *** [/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib/../../lib/GlobalSubDirs:5: default] Error 1 make[2]: Leaving directory '/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/lib' make[1]: *** [/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src/../lib/GlobalSubDirs:5: default] Error 1 make[1]: Leaving directory '/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/src' make: *** [/home/pbulk/build/biology/mpqc/work/mpqc-2.3.1/./lib/GlobalSubDirs:5: default] Error 1 *** Error code 2 Stop. bmake[1]: stopped making "all" in /data/jenkins/workspace/pkgsrc-el9-trunk-x86_64/biology/mpqc *** Error code 1 Stop. bmake: stopped making "all" in /data/jenkins/workspace/pkgsrc-el9-trunk-x86_64/biology/mpqc