+ case "${usergroup_phase}" in + local run_cmd + run_cmd=run_su + shift + run_su /usr/pkg/bin/bmake configure BATCH=1 DEPENDS_TARGET=/nonexistent PYTHON_VERSION_REQD=311 WRKLOG=/tmp/bulklog/py311-biopython-1.81/work.log + su pbulk -c '"$@"' make /usr/pkg/bin/bmake configure BATCH=1 DEPENDS_TARGET=/nonexistent PYTHON_VERSION_REQD=311 WRKLOG=/tmp/bulklog/py311-biopython-1.81/work.log => Bootstrap dependency digest>=20211023: found digest-20220214 => Checksum BLAKE2s OK for biopython-1.81.tar.gz => Checksum SHA512 OK for biopython-1.81.tar.gz ===> Installing dependencies for py311-biopython-1.81 ========================================================================== The following variables will affect the build process of this package, py311-biopython-1.81. Their current value is shown below: * PKGSRC_BLAS_TYPES = netlib openblas openblas_pthread openblas_openmp * PYTHON_VERSION_DEFAULT = 312 Based on these variables, the following variables have been set: * BLAS_INCLUDES = -I/usr/pkg/include/netlib * BLAS_LIBS = -lblas * BLAS_PC = blas * BLAS_TYPE = netlib * CBLAS_LIBS = -lcblas -lblas * CBLAS_PC = cblas * LAPACKE_LIBS = -llapacke -llapack -lblas * LAPACKE_PC = lapacke * LAPACK_LIBS = -llapack -lblas * LAPACK_PC = lapack * PYPACKAGE = python311 You may want to abort the process now with CTRL-C and change the value of variables in the first group before continuing. Be sure to run `/usr/pkg/bin/bmake clean' after the changes. ========================================================================== => Tool dependency py311-setuptools-[0-9]*: found py311-setuptools-75.3.0 => Tool dependency py311-wheel-[0-9]*: found py311-wheel-0.45.0 => Tool dependency py311-build>=0: found py311-build-1.2.2.post1 => Tool dependency py311-installer>=0.7.0nb1: found py311-installer-0.7.0nb1 => Tool dependency mktools-[0-9]*: found mktools-20220614 => Tool dependency pax>=20040802: found pax-20210219 => Tool dependency cwrappers>=20150314: found cwrappers-20220403 => Tool dependency checkperms>=1.1: found checkperms-1.12 => Full dependency py311-numpy>=1.20.3nb1: found py311-numpy-2.1.3 => Full dependency python311>=3.11.0: found python311-3.11.10nb2 => Full dependency blas>=3.9.0: found blas-3.12.0 => Full dependency cblas>=3.9.0: found cblas-3.12.0 => Full dependency lapack>=3.9.0: found lapack-3.12.0 => Full dependency lapacke>=3.9.0: found lapacke-3.12.0 ===> Overriding tools for py311-biopython-1.81 ===> Extracting for py311-biopython-1.81 ===> Patching for py311-biopython-1.81 ===> Creating toolchain wrappers for py311-biopython-1.81 ===> Configuring for py311-biopython-1.81