+ case "${usergroup_phase}" in
+ local run_cmd
+ run_cmd=run_su
+ shift
+ run_su /usr/pkg/bin/bmake all BATCH=1 DEPENDS_TARGET=/nonexistent WRKLOG=/tmp/bulklog/libpll-0.3.2/work.log
+ su pbulk -c '"$@"' make /usr/pkg/bin/bmake all BATCH=1 DEPENDS_TARGET=/nonexistent WRKLOG=/tmp/bulklog/libpll-0.3.2/work.log
=> Bootstrap dependency digest>=20211023: found digest-20220214
===> Building for libpll-0.3.2
--- ./aclocal.m4 ---
CDPATH="${ZSH_VERSION+.}:" && cd . && /bin/bash /home/pbulk/build/biology/libpll/work/libpll-src-0.3.2/missing aclocal-1.14 -I m4 --install
WARNING: 'aclocal' is missing on your system. You should only need it if
you modified 'acinclude.m4' or 'configure.ac'. You might want
to install the Automake and Perl packages. Grab them from
any GNU archive site.
--- ./configure ---
--- ./config.h.in ---
--- ./configure ---
CDPATH="${ZSH_VERSION+.}:" && cd . && /bin/bash /home/pbulk/build/biology/libpll/work/libpll-src-0.3.2/missing autoconf
--- ./config.h.in ---
(CDPATH="${ZSH_VERSION+.}:" && cd . && /bin/bash /home/pbulk/build/biology/libpll/work/libpll-src-0.3.2/missing autoheader)
--- ./configure ---
WARNING: 'autoconf' is missing on your system. You should only need it if
you modified 'configure.ac'. You might want to install the
Autoconf and GNU m4 packages. Grab them from any GNU
archive site.
--- ./config.status ---
--- ./config.h.in ---
WARNING: 'autoheader' is missing on your system. You should only need it if
you modified 'acconfig.h' or 'configure.ac'. You might want
to install the Autoconf and GNU m4 packages. Grab them
from any GNU archive site.
--- ./config.status ---
/bin/bash ./config.status --recheck
--- ./config.h.in ---
rm -f stamp-h1
touch ./config.h.in
--- stamp-h1 ---
cd . && /bin/bash ./config.status config.h
config.status: creating config.h
config.status: config.h is unchanged
--- config.h ---
--- all ---
/usr/pkg/bin/bmake all-recursive
--- all-recursive ---
Making all in src
--- ./Makefile.in ---
--- ../config.status ---
--- ./Makefile.in ---
--- ./Makefile.in ---
--- ../config.status ---
cd .. && /usr/pkg/bin/bmake am--refresh
--- ./Makefile.in ---
cd . && /bin/bash /home/pbulk/build/biology/libpll/work/libpll-src-0.3.2/missing automake-1.14 --foreign
--- ../config.status ---
--- ./Makefile.in ---
cd . && /bin/bash /home/pbulk/build/biology/libpll/work/libpll-src-0.3.2/missing automake-1.14 --foreign
--- ./Makefile.in ---
WARNING: 'automake' is missing on your system. You should only need it if
you modified 'Makefile.am', 'acinclude.m4' or 'configure.ac'.
You might want to install the Automake and Perl packages.
Grab them from any GNU archive site.
--- ../config.status ---
WARNING: 'automake' is missing on your system. You should only need it if
you modified 'Makefile.am', 'acinclude.m4' or 'configure.ac'.
You might want to install the Automake and Perl packages.
Grab them from any GNU archive site.
--- ./Makefile.in ---
--- ./config.status ---
/bin/bash ./config.status --recheck
--- ../config.status ---
--- ./config.status ---
/bin/bash ./config.status --recheck
--- ./Makefile.in ---
--- Makefile ---
cd . && /bin/bash ./config.status Makefile
--- ../config.status ---
--- Makefile ---
cd . && /bin/bash ./config.status Makefile
config.status: creating Makefile
--- ./Makefile.in ---
config.status: creating Makefile
--- ../config.status ---
--- am--refresh ---
--- libpll_la-fasta.lo ---
/bin/bash ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I.. -I/usr/pkg/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g -MT libpll_la-fasta.lo -MD -MP -MF .deps/libpll_la-fasta.Tpo -c -o libpll_la-fasta.lo `test -f 'fasta.c' || echo './'`fasta.c
--- ./Makefile.in ---
--- am--refresh ---
--- libpll_la-gamma.lo ---
/bin/bash ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I.. -I/usr/pkg/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g -MT libpll_la-gamma.lo -MD -MP -MF .deps/libpll_la-gamma.Tpo -c -o libpll_la-gamma.lo `test -f 'gamma.c' || echo './'`gamma.c
--- libpll_la-fasta.lo ---
libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I/home/pbulk/build/biology/libpll/work/.buildlink/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g -MT libpll_la-fasta.lo -MD -MP -MF .deps/libpll_la-fasta.Tpo -c fasta.c -fPIC -DPIC -o .libs/libpll_la-fasta.o
--- libpll_la-gamma.lo ---
libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I/home/pbulk/build/biology/libpll/work/.buildlink/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g -MT libpll_la-gamma.lo -MD -MP -MF .deps/libpll_la-gamma.Tpo -c gamma.c -fPIC -DPIC -o .libs/libpll_la-gamma.o
libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I/home/pbulk/build/biology/libpll/work/.buildlink/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g -MT libpll_la-gamma.lo -MD -MP -MF .deps/libpll_la-gamma.Tpo -c gamma.c -o libpll_la-gamma.o >/dev/null 2>&1
--- libpll_la-fasta.lo ---
libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I/home/pbulk/build/biology/libpll/work/.buildlink/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g -MT libpll_la-fasta.lo -MD -MP -MF .deps/libpll_la-fasta.Tpo -c fasta.c -o libpll_la-fasta.o >/dev/null 2>&1
--- libpll_la-gamma.lo ---
mv -f .deps/libpll_la-gamma.Tpo .deps/libpll_la-gamma.Plo
--- libpll_la-likelihood.lo ---
/bin/bash ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I.. -I/usr/pkg/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g -MT libpll_la-likelihood.lo -MD -MP -MF .deps/libpll_la-likelihood.Tpo -c -o libpll_la-likelihood.lo `test -f 'likelihood.c' || echo './'`likelihood.c
--- libpll_la-fasta.lo ---
mv -f .deps/libpll_la-fasta.Tpo .deps/libpll_la-fasta.Plo
--- libpll_la-list.lo ---
/bin/bash ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I.. -I/usr/pkg/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g -MT libpll_la-list.lo -MD -MP -MF .deps/libpll_la-list.Tpo -c -o libpll_la-list.lo `test -f 'list.c' || echo './'`list.c
--- libpll_la-likelihood.lo ---
libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I/home/pbulk/build/biology/libpll/work/.buildlink/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g -MT libpll_la-likelihood.lo -MD -MP -MF .deps/libpll_la-likelihood.Tpo -c likelihood.c -fPIC -DPIC -o .libs/libpll_la-likelihood.o
--- libpll_la-list.lo ---
libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I/home/pbulk/build/biology/libpll/work/.buildlink/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g -MT libpll_la-list.lo -MD -MP -MF .deps/libpll_la-list.Tpo -c list.c -fPIC -DPIC -o .libs/libpll_la-list.o
libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I/home/pbulk/build/biology/libpll/work/.buildlink/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g -MT libpll_la-list.lo -MD -MP -MF .deps/libpll_la-list.Tpo -c list.c -o libpll_la-list.o >/dev/null 2>&1
--- libpll_la-likelihood.lo ---
libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I/home/pbulk/build/biology/libpll/work/.buildlink/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g -MT libpll_la-likelihood.lo -MD -MP -MF .deps/libpll_la-likelihood.Tpo -c likelihood.c -o libpll_la-likelihood.o >/dev/null 2>&1
--- libpll_la-list.lo ---
mv -f .deps/libpll_la-list.Tpo .deps/libpll_la-list.Plo
--- libpll_la-maps.lo ---
/bin/bash ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I.. -I/usr/pkg/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g -MT libpll_la-maps.lo -MD -MP -MF .deps/libpll_la-maps.Tpo -c -o libpll_la-maps.lo `test -f 'maps.c' || echo './'`maps.c
--- libpll_la-likelihood.lo ---
mv -f .deps/libpll_la-likelihood.Tpo .deps/libpll_la-likelihood.Plo
--- libpll_la-models.lo ---
/bin/bash ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I.. -I/usr/pkg/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g -MT libpll_la-models.lo -MD -MP -MF .deps/libpll_la-models.Tpo -c -o libpll_la-models.lo `test -f 'models.c' || echo './'`models.c
--- libpll_la-maps.lo ---
libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I/home/pbulk/build/biology/libpll/work/.buildlink/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g -MT libpll_la-maps.lo -MD -MP -MF .deps/libpll_la-maps.Tpo -c maps.c -fPIC -DPIC -o .libs/libpll_la-maps.o
--- libpll_la-models.lo ---
libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I/home/pbulk/build/biology/libpll/work/.buildlink/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g -MT libpll_la-models.lo -MD -MP -MF .deps/libpll_la-models.Tpo -c models.c -fPIC -DPIC -o .libs/libpll_la-models.o
--- libpll_la-maps.lo ---
libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I/home/pbulk/build/biology/libpll/work/.buildlink/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g -MT libpll_la-maps.lo -MD -MP -MF .deps/libpll_la-maps.Tpo -c maps.c -o libpll_la-maps.o >/dev/null 2>&1
mv -f .deps/libpll_la-maps.Tpo .deps/libpll_la-maps.Plo
--- libpll_la-pll.lo ---
/bin/bash ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I.. -I/usr/pkg/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g -MT libpll_la-pll.lo -MD -MP -MF .deps/libpll_la-pll.Tpo -c -o libpll_la-pll.lo `test -f 'pll.c' || echo './'`pll.c
--- libpll_la-models.lo ---
libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I/home/pbulk/build/biology/libpll/work/.buildlink/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g -MT libpll_la-models.lo -MD -MP -MF .deps/libpll_la-models.Tpo -c models.c -o libpll_la-models.o >/dev/null 2>&1
--- libpll_la-pll.lo ---
libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I/home/pbulk/build/biology/libpll/work/.buildlink/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g -MT libpll_la-pll.lo -MD -MP -MF .deps/libpll_la-pll.Tpo -c pll.c -fPIC -DPIC -o .libs/libpll_la-pll.o
libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I/home/pbulk/build/biology/libpll/work/.buildlink/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g -MT libpll_la-pll.lo -MD -MP -MF .deps/libpll_la-pll.Tpo -c pll.c -o libpll_la-pll.o >/dev/null 2>&1
--- libpll_la-models.lo ---
mv -f .deps/libpll_la-models.Tpo .deps/libpll_la-models.Plo
--- libpll_la-output.lo ---
/bin/bash ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I.. -I/usr/pkg/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g -MT libpll_la-output.lo -MD -MP -MF .deps/libpll_la-output.Tpo -c -o libpll_la-output.lo `test -f 'output.c' || echo './'`output.c
libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I/home/pbulk/build/biology/libpll/work/.buildlink/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g -MT libpll_la-output.lo -MD -MP -MF .deps/libpll_la-output.Tpo -c output.c -fPIC -DPIC -o .libs/libpll_la-output.o
libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I/home/pbulk/build/biology/libpll/work/.buildlink/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g -MT libpll_la-output.lo -MD -MP -MF .deps/libpll_la-output.Tpo -c output.c -o libpll_la-output.o >/dev/null 2>&1
--- libpll_la-pll.lo ---
mv -f .deps/libpll_la-pll.Tpo .deps/libpll_la-pll.Plo
--- libpll_la-utree.lo ---
/bin/bash ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I.. -I/usr/pkg/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g -MT libpll_la-utree.lo -MD -MP -MF .deps/libpll_la-utree.Tpo -c -o libpll_la-utree.lo `test -f 'utree.c' || echo './'`utree.c
--- libpll_la-output.lo ---
mv -f .deps/libpll_la-output.Tpo .deps/libpll_la-output.Plo
--- libpll_la-rtree.lo ---
/bin/bash ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I.. -I/usr/pkg/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g -MT libpll_la-rtree.lo -MD -MP -MF .deps/libpll_la-rtree.Tpo -c -o libpll_la-rtree.lo `test -f 'rtree.c' || echo './'`rtree.c
--- libpll_la-utree.lo ---
libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I/home/pbulk/build/biology/libpll/work/.buildlink/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g -MT libpll_la-utree.lo -MD -MP -MF .deps/libpll_la-utree.Tpo -c utree.c -fPIC -DPIC -o .libs/libpll_la-utree.o
--- libpll_la-rtree.lo ---
libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I/home/pbulk/build/biology/libpll/work/.buildlink/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g -MT libpll_la-rtree.lo -MD -MP -MF .deps/libpll_la-rtree.Tpo -c rtree.c -fPIC -DPIC -o .libs/libpll_la-rtree.o
--- libpll_la-utree.lo ---
libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I/home/pbulk/build/biology/libpll/work/.buildlink/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g -MT libpll_la-utree.lo -MD -MP -MF .deps/libpll_la-utree.Tpo -c utree.c -o libpll_la-utree.o >/dev/null 2>&1
--- libpll_la-rtree.lo ---
libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I/home/pbulk/build/biology/libpll/work/.buildlink/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g -MT libpll_la-rtree.lo -MD -MP -MF .deps/libpll_la-rtree.Tpo -c rtree.c -o libpll_la-rtree.o >/dev/null 2>&1
--- libpll_la-utree.lo ---
mv -f .deps/libpll_la-utree.Tpo .deps/libpll_la-utree.Plo
--- libpll_la-derivatives.lo ---
/bin/bash ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I.. -I/usr/pkg/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g -MT libpll_la-derivatives.lo -MD -MP -MF .deps/libpll_la-derivatives.Tpo -c -o libpll_la-derivatives.lo `test -f 'derivatives.c' || echo './'`derivatives.c
libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I/home/pbulk/build/biology/libpll/work/.buildlink/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g -MT libpll_la-derivatives.lo -MD -MP -MF .deps/libpll_la-derivatives.Tpo -c derivatives.c -fPIC -DPIC -o .libs/libpll_la-derivatives.o
--- libpll_la-rtree.lo ---
mv -f .deps/libpll_la-rtree.Tpo .deps/libpll_la-rtree.Plo
--- libpll_la-partials.lo ---
/bin/bash ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I.. -I/usr/pkg/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g -MT libpll_la-partials.lo -MD -MP -MF .deps/libpll_la-partials.Tpo -c -o libpll_la-partials.lo `test -f 'partials.c' || echo './'`partials.c
libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I/home/pbulk/build/biology/libpll/work/.buildlink/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g -MT libpll_la-partials.lo -MD -MP -MF .deps/libpll_la-partials.Tpo -c partials.c -fPIC -DPIC -o .libs/libpll_la-partials.o
--- libpll_la-derivatives.lo ---
libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I/home/pbulk/build/biology/libpll/work/.buildlink/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g -MT libpll_la-derivatives.lo -MD -MP -MF .deps/libpll_la-derivatives.Tpo -c derivatives.c -o libpll_la-derivatives.o >/dev/null 2>&1
--- libpll_la-partials.lo ---
libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I/home/pbulk/build/biology/libpll/work/.buildlink/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g -MT libpll_la-partials.lo -MD -MP -MF .deps/libpll_la-partials.Tpo -c partials.c -o libpll_la-partials.o >/dev/null 2>&1
--- libpll_la-derivatives.lo ---
mv -f .deps/libpll_la-derivatives.Tpo .deps/libpll_la-derivatives.Plo
--- libpll_la-compress.lo ---
/bin/bash ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I.. -I/usr/pkg/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g -MT libpll_la-compress.lo -MD -MP -MF .deps/libpll_la-compress.Tpo -c -o libpll_la-compress.lo `test -f 'compress.c' || echo './'`compress.c
libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I/home/pbulk/build/biology/libpll/work/.buildlink/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g -MT libpll_la-compress.lo -MD -MP -MF .deps/libpll_la-compress.Tpo -c compress.c -fPIC -DPIC -o .libs/libpll_la-compress.o
--- libpll_la-partials.lo ---
mv -f .deps/libpll_la-partials.Tpo .deps/libpll_la-partials.Plo
--- libpll_la-utree_moves.lo ---
/bin/bash ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I.. -I/usr/pkg/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g -MT libpll_la-utree_moves.lo -MD -MP -MF .deps/libpll_la-utree_moves.Tpo -c -o libpll_la-utree_moves.lo `test -f 'utree_moves.c' || echo './'`utree_moves.c
libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I/home/pbulk/build/biology/libpll/work/.buildlink/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g -MT libpll_la-utree_moves.lo -MD -MP -MF .deps/libpll_la-utree_moves.Tpo -c utree_moves.c -fPIC -DPIC -o .libs/libpll_la-utree_moves.o
--- libpll_la-compress.lo ---
libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I/home/pbulk/build/biology/libpll/work/.buildlink/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g -MT libpll_la-compress.lo -MD -MP -MF .deps/libpll_la-compress.Tpo -c compress.c -o libpll_la-compress.o >/dev/null 2>&1
--- libpll_la-utree_moves.lo ---
libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I/home/pbulk/build/biology/libpll/work/.buildlink/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g -MT libpll_la-utree_moves.lo -MD -MP -MF .deps/libpll_la-utree_moves.Tpo -c utree_moves.c -o libpll_la-utree_moves.o >/dev/null 2>&1
--- libpll_la-compress.lo ---
mv -f .deps/libpll_la-compress.Tpo .deps/libpll_la-compress.Plo
--- libpll_la-utree_svg.lo ---
/bin/bash ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I.. -I/usr/pkg/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g -MT libpll_la-utree_svg.lo -MD -MP -MF .deps/libpll_la-utree_svg.Tpo -c -o libpll_la-utree_svg.lo `test -f 'utree_svg.c' || echo './'`utree_svg.c
--- libpll_la-utree_moves.lo ---
mv -f .deps/libpll_la-utree_moves.Tpo .deps/libpll_la-utree_moves.Plo
--- libpll_la-parsimony.lo ---
/bin/bash ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I.. -I/usr/pkg/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g -MT libpll_la-parsimony.lo -MD -MP -MF .deps/libpll_la-parsimony.Tpo -c -o libpll_la-parsimony.lo `test -f 'parsimony.c' || echo './'`parsimony.c
--- libpll_la-utree_svg.lo ---
libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I/home/pbulk/build/biology/libpll/work/.buildlink/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g -MT libpll_la-utree_svg.lo -MD -MP -MF .deps/libpll_la-utree_svg.Tpo -c utree_svg.c -fPIC -DPIC -o .libs/libpll_la-utree_svg.o
--- libpll_la-parsimony.lo ---
libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I/home/pbulk/build/biology/libpll/work/.buildlink/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g -MT libpll_la-parsimony.lo -MD -MP -MF .deps/libpll_la-parsimony.Tpo -c parsimony.c -fPIC -DPIC -o .libs/libpll_la-parsimony.o
--- libpll_la-utree_svg.lo ---
libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I/home/pbulk/build/biology/libpll/work/.buildlink/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g -MT libpll_la-utree_svg.lo -MD -MP -MF .deps/libpll_la-utree_svg.Tpo -c utree_svg.c -o libpll_la-utree_svg.o >/dev/null 2>&1
--- libpll_la-parsimony.lo ---
libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I/home/pbulk/build/biology/libpll/work/.buildlink/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g -MT libpll_la-parsimony.lo -MD -MP -MF .deps/libpll_la-parsimony.Tpo -c parsimony.c -o libpll_la-parsimony.o >/dev/null 2>&1
mv -f .deps/libpll_la-parsimony.Tpo .deps/libpll_la-parsimony.Plo
--- libpll_la-core_derivatives.lo ---
/bin/bash ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I.. -I/usr/pkg/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g -MT libpll_la-core_derivatives.lo -MD -MP -MF .deps/libpll_la-core_derivatives.Tpo -c -o libpll_la-core_derivatives.lo `test -f 'core_derivatives.c' || echo './'`core_derivatives.c
libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I/home/pbulk/build/biology/libpll/work/.buildlink/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g -MT libpll_la-core_derivatives.lo -MD -MP -MF .deps/libpll_la-core_derivatives.Tpo -c core_derivatives.c -fPIC -DPIC -o .libs/libpll_la-core_derivatives.o
--- libpll_la-utree_svg.lo ---
mv -f .deps/libpll_la-utree_svg.Tpo .deps/libpll_la-utree_svg.Plo
--- libpll_la-core_partials.lo ---
/bin/bash ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I.. -I/usr/pkg/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g -MT libpll_la-core_partials.lo -MD -MP -MF .deps/libpll_la-core_partials.Tpo -c -o libpll_la-core_partials.lo `test -f 'core_partials.c' || echo './'`core_partials.c
libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I/home/pbulk/build/biology/libpll/work/.buildlink/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g -MT libpll_la-core_partials.lo -MD -MP -MF .deps/libpll_la-core_partials.Tpo -c core_partials.c -fPIC -DPIC -o .libs/libpll_la-core_partials.o
--- libpll_la-core_derivatives.lo ---
libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I/home/pbulk/build/biology/libpll/work/.buildlink/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g -MT libpll_la-core_derivatives.lo -MD -MP -MF .deps/libpll_la-core_derivatives.Tpo -c core_derivatives.c -o libpll_la-core_derivatives.o >/dev/null 2>&1
--- libpll_la-core_partials.lo ---
libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I/home/pbulk/build/biology/libpll/work/.buildlink/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g -MT libpll_la-core_partials.lo -MD -MP -MF .deps/libpll_la-core_partials.Tpo -c core_partials.c -o libpll_la-core_partials.o >/dev/null 2>&1
--- libpll_la-core_derivatives.lo ---
mv -f .deps/libpll_la-core_derivatives.Tpo .deps/libpll_la-core_derivatives.Plo
--- libpll_la-core_pmatrix.lo ---
/bin/bash ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I.. -I/usr/pkg/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g -MT libpll_la-core_pmatrix.lo -MD -MP -MF .deps/libpll_la-core_pmatrix.Tpo -c -o libpll_la-core_pmatrix.lo `test -f 'core_pmatrix.c' || echo './'`core_pmatrix.c
libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I/home/pbulk/build/biology/libpll/work/.buildlink/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g -MT libpll_la-core_pmatrix.lo -MD -MP -MF .deps/libpll_la-core_pmatrix.Tpo -c core_pmatrix.c -fPIC -DPIC -o .libs/libpll_la-core_pmatrix.o
--- libpll_la-core_partials.lo ---
mv -f .deps/libpll_la-core_partials.Tpo .deps/libpll_la-core_partials.Plo
--- libpll_la-core_likelihood.lo ---
/bin/bash ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I.. -I/usr/pkg/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g -MT libpll_la-core_likelihood.lo -MD -MP -MF .deps/libpll_la-core_likelihood.Tpo -c -o libpll_la-core_likelihood.lo `test -f 'core_likelihood.c' || echo './'`core_likelihood.c
libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I/home/pbulk/build/biology/libpll/work/.buildlink/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g -MT libpll_la-core_likelihood.lo -MD -MP -MF .deps/libpll_la-core_likelihood.Tpo -c core_likelihood.c -fPIC -DPIC -o .libs/libpll_la-core_likelihood.o
--- libpll_la-core_pmatrix.lo ---
libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I/home/pbulk/build/biology/libpll/work/.buildlink/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g -MT libpll_la-core_pmatrix.lo -MD -MP -MF .deps/libpll_la-core_pmatrix.Tpo -c core_pmatrix.c -o libpll_la-core_pmatrix.o >/dev/null 2>&1
mv -f .deps/libpll_la-core_pmatrix.Tpo .deps/libpll_la-core_pmatrix.Plo
--- libpll_la-fast_parsimony.lo ---
/bin/bash ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I.. -I/usr/pkg/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g -MT libpll_la-fast_parsimony.lo -MD -MP -MF .deps/libpll_la-fast_parsimony.Tpo -c -o libpll_la-fast_parsimony.lo `test -f 'fast_parsimony.c' || echo './'`fast_parsimony.c
--- libpll_la-core_likelihood.lo ---
libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I/home/pbulk/build/biology/libpll/work/.buildlink/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g -MT libpll_la-core_likelihood.lo -MD -MP -MF .deps/libpll_la-core_likelihood.Tpo -c core_likelihood.c -o libpll_la-core_likelihood.o >/dev/null 2>&1
--- libpll_la-fast_parsimony.lo ---
libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I/home/pbulk/build/biology/libpll/work/.buildlink/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g -MT libpll_la-fast_parsimony.lo -MD -MP -MF .deps/libpll_la-fast_parsimony.Tpo -c fast_parsimony.c -fPIC -DPIC -o .libs/libpll_la-fast_parsimony.o
--- libpll_la-core_likelihood.lo ---
mv -f .deps/libpll_la-core_likelihood.Tpo .deps/libpll_la-core_likelihood.Plo
--- libpll_la-stepwise.lo ---
/bin/bash ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I.. -I/usr/pkg/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g -MT libpll_la-stepwise.lo -MD -MP -MF .deps/libpll_la-stepwise.Tpo -c -o libpll_la-stepwise.lo `test -f 'stepwise.c' || echo './'`stepwise.c
--- libpll_la-fast_parsimony.lo ---
libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I/home/pbulk/build/biology/libpll/work/.buildlink/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g -MT libpll_la-fast_parsimony.lo -MD -MP -MF .deps/libpll_la-fast_parsimony.Tpo -c fast_parsimony.c -o libpll_la-fast_parsimony.o >/dev/null 2>&1
--- libpll_la-stepwise.lo ---
libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I/home/pbulk/build/biology/libpll/work/.buildlink/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g -MT libpll_la-stepwise.lo -MD -MP -MF .deps/libpll_la-stepwise.Tpo -c stepwise.c -fPIC -DPIC -o .libs/libpll_la-stepwise.o
libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I/home/pbulk/build/biology/libpll/work/.buildlink/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g -MT libpll_la-stepwise.lo -MD -MP -MF .deps/libpll_la-stepwise.Tpo -c stepwise.c -o libpll_la-stepwise.o >/dev/null 2>&1
--- libpll_la-fast_parsimony.lo ---
mv -f .deps/libpll_la-fast_parsimony.Tpo .deps/libpll_la-fast_parsimony.Plo
--- libpll_la-random.lo ---
/bin/bash ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I.. -I/usr/pkg/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g -MT libpll_la-random.lo -MD -MP -MF .deps/libpll_la-random.Tpo -c -o libpll_la-random.lo `test -f 'random.c' || echo './'`random.c
libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I/home/pbulk/build/biology/libpll/work/.buildlink/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g -MT libpll_la-random.lo -MD -MP -MF .deps/libpll_la-random.Tpo -c random.c -fPIC -DPIC -o .libs/libpll_la-random.o
--- libpll_la-stepwise.lo ---
mv -f .deps/libpll_la-stepwise.Tpo .deps/libpll_la-stepwise.Plo
--- libpll_la-phylip.lo ---
/bin/bash ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I.. -I/usr/pkg/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g -MT libpll_la-phylip.lo -MD -MP -MF .deps/libpll_la-phylip.Tpo -c -o libpll_la-phylip.lo `test -f 'phylip.c' || echo './'`phylip.c
libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I/home/pbulk/build/biology/libpll/work/.buildlink/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g -MT libpll_la-phylip.lo -MD -MP -MF .deps/libpll_la-phylip.Tpo -c phylip.c -fPIC -DPIC -o .libs/libpll_la-phylip.o
--- libpll_la-random.lo ---
libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I/home/pbulk/build/biology/libpll/work/.buildlink/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g -MT libpll_la-random.lo -MD -MP -MF .deps/libpll_la-random.Tpo -c random.c -o libpll_la-random.o >/dev/null 2>&1
--- libpll_la-phylip.lo ---
libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I/home/pbulk/build/biology/libpll/work/.buildlink/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g -MT libpll_la-phylip.lo -MD -MP -MF .deps/libpll_la-phylip.Tpo -c phylip.c -o libpll_la-phylip.o >/dev/null 2>&1
--- libpll_la-random.lo ---
mv -f .deps/libpll_la-random.Tpo .deps/libpll_la-random.Plo
--- libpll_la-hardware.lo ---
/bin/bash ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I.. -I/usr/pkg/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g -MT libpll_la-hardware.lo -MD -MP -MF .deps/libpll_la-hardware.Tpo -c -o libpll_la-hardware.lo `test -f 'hardware.c' || echo './'`hardware.c
libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I/home/pbulk/build/biology/libpll/work/.buildlink/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g -MT libpll_la-hardware.lo -MD -MP -MF .deps/libpll_la-hardware.Tpo -c hardware.c -fPIC -DPIC -o .libs/libpll_la-hardware.o
--- libpll_la-phylip.lo ---
mv -f .deps/libpll_la-phylip.Tpo .deps/libpll_la-phylip.Plo
--- libsimd_avx2_la-core_partials_avx2.lo ---
/bin/bash ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I.. -I/usr/pkg/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -mfma -mavx2 -g -MT libsimd_avx2_la-core_partials_avx2.lo -MD -MP -MF .deps/libsimd_avx2_la-core_partials_avx2.Tpo -c -o libsimd_avx2_la-core_partials_avx2.lo `test -f 'core_partials_avx2.c' || echo './'`core_partials_avx2.c
libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I/home/pbulk/build/biology/libpll/work/.buildlink/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -mfma -mavx2 -g -MT libsimd_avx2_la-core_partials_avx2.lo -MD -MP -MF .deps/libsimd_avx2_la-core_partials_avx2.Tpo -c core_partials_avx2.c -fPIC -DPIC -o .libs/libsimd_avx2_la-core_partials_avx2.o
--- libpll_la-hardware.lo ---
libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I/home/pbulk/build/biology/libpll/work/.buildlink/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g -MT libpll_la-hardware.lo -MD -MP -MF .deps/libpll_la-hardware.Tpo -c hardware.c -o libpll_la-hardware.o >/dev/null 2>&1
mv -f .deps/libpll_la-hardware.Tpo .deps/libpll_la-hardware.Plo
--- libsimd_avx2_la-core_derivatives_avx2.lo ---
/bin/bash ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I.. -I/usr/pkg/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -mfma -mavx2 -g -MT libsimd_avx2_la-core_derivatives_avx2.lo -MD -MP -MF .deps/libsimd_avx2_la-core_derivatives_avx2.Tpo -c -o libsimd_avx2_la-core_derivatives_avx2.lo `test -f 'core_derivatives_avx2.c' || echo './'`core_derivatives_avx2.c
libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I/home/pbulk/build/biology/libpll/work/.buildlink/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -mfma -mavx2 -g -MT libsimd_avx2_la-core_derivatives_avx2.lo -MD -MP -MF .deps/libsimd_avx2_la-core_derivatives_avx2.Tpo -c core_derivatives_avx2.c -fPIC -DPIC -o .libs/libsimd_avx2_la-core_derivatives_avx2.o
--- libsimd_avx2_la-core_partials_avx2.lo ---
libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I/home/pbulk/build/biology/libpll/work/.buildlink/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -mfma -mavx2 -g -MT libsimd_avx2_la-core_partials_avx2.lo -MD -MP -MF .deps/libsimd_avx2_la-core_partials_avx2.Tpo -c core_partials_avx2.c -o libsimd_avx2_la-core_partials_avx2.o >/dev/null 2>&1
--- libsimd_avx2_la-core_derivatives_avx2.lo ---
libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I/home/pbulk/build/biology/libpll/work/.buildlink/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -mfma -mavx2 -g -MT libsimd_avx2_la-core_derivatives_avx2.lo -MD -MP -MF .deps/libsimd_avx2_la-core_derivatives_avx2.Tpo -c core_derivatives_avx2.c -o libsimd_avx2_la-core_derivatives_avx2.o >/dev/null 2>&1
--- libsimd_avx2_la-core_partials_avx2.lo ---
mv -f .deps/libsimd_avx2_la-core_partials_avx2.Tpo .deps/libsimd_avx2_la-core_partials_avx2.Plo
--- libsimd_avx2_la-core_pmatrix_avx2.lo ---
/bin/bash ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I.. -I/usr/pkg/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -mfma -mavx2 -g -MT libsimd_avx2_la-core_pmatrix_avx2.lo -MD -MP -MF .deps/libsimd_avx2_la-core_pmatrix_avx2.Tpo -c -o libsimd_avx2_la-core_pmatrix_avx2.lo `test -f 'core_pmatrix_avx2.c' || echo './'`core_pmatrix_avx2.c
libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I/home/pbulk/build/biology/libpll/work/.buildlink/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -mfma -mavx2 -g -MT libsimd_avx2_la-core_pmatrix_avx2.lo -MD -MP -MF .deps/libsimd_avx2_la-core_pmatrix_avx2.Tpo -c core_pmatrix_avx2.c -fPIC -DPIC -o .libs/libsimd_avx2_la-core_pmatrix_avx2.o
--- libsimd_avx2_la-core_derivatives_avx2.lo ---
mv -f .deps/libsimd_avx2_la-core_derivatives_avx2.Tpo .deps/libsimd_avx2_la-core_derivatives_avx2.Plo
--- libsimd_avx2_la-core_likelihood_avx2.lo ---
/bin/bash ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I.. -I/usr/pkg/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -mfma -mavx2 -g -MT libsimd_avx2_la-core_likelihood_avx2.lo -MD -MP -MF .deps/libsimd_avx2_la-core_likelihood_avx2.Tpo -c -o libsimd_avx2_la-core_likelihood_avx2.lo `test -f 'core_likelihood_avx2.c' || echo './'`core_likelihood_avx2.c
--- libsimd_avx2_la-core_pmatrix_avx2.lo ---
libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I/home/pbulk/build/biology/libpll/work/.buildlink/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -mfma -mavx2 -g -MT libsimd_avx2_la-core_pmatrix_avx2.lo -MD -MP -MF .deps/libsimd_avx2_la-core_pmatrix_avx2.Tpo -c core_pmatrix_avx2.c -o libsimd_avx2_la-core_pmatrix_avx2.o >/dev/null 2>&1
--- libsimd_avx2_la-core_likelihood_avx2.lo ---
libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I/home/pbulk/build/biology/libpll/work/.buildlink/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -mfma -mavx2 -g -MT libsimd_avx2_la-core_likelihood_avx2.lo -MD -MP -MF .deps/libsimd_avx2_la-core_likelihood_avx2.Tpo -c core_likelihood_avx2.c -fPIC -DPIC -o .libs/libsimd_avx2_la-core_likelihood_avx2.o
--- libsimd_avx2_la-core_pmatrix_avx2.lo ---
mv -f .deps/libsimd_avx2_la-core_pmatrix_avx2.Tpo .deps/libsimd_avx2_la-core_pmatrix_avx2.Plo
--- libsimd_avx2_la-fast_parsimony_avx2.lo ---
/bin/bash ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I.. -I/usr/pkg/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -mfma -mavx2 -g -MT libsimd_avx2_la-fast_parsimony_avx2.lo -MD -MP -MF .deps/libsimd_avx2_la-fast_parsimony_avx2.Tpo -c -o libsimd_avx2_la-fast_parsimony_avx2.lo `test -f 'fast_parsimony_avx2.c' || echo './'`fast_parsimony_avx2.c
--- libsimd_avx2_la-core_likelihood_avx2.lo ---
libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I/home/pbulk/build/biology/libpll/work/.buildlink/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -mfma -mavx2 -g -MT libsimd_avx2_la-core_likelihood_avx2.lo -MD -MP -MF .deps/libsimd_avx2_la-core_likelihood_avx2.Tpo -c core_likelihood_avx2.c -o libsimd_avx2_la-core_likelihood_avx2.o >/dev/null 2>&1
--- libsimd_avx2_la-fast_parsimony_avx2.lo ---
libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I/home/pbulk/build/biology/libpll/work/.buildlink/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -mfma -mavx2 -g -MT libsimd_avx2_la-fast_parsimony_avx2.lo -MD -MP -MF .deps/libsimd_avx2_la-fast_parsimony_avx2.Tpo -c fast_parsimony_avx2.c -fPIC -DPIC -o .libs/libsimd_avx2_la-fast_parsimony_avx2.o
libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I/home/pbulk/build/biology/libpll/work/.buildlink/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -mfma -mavx2 -g -MT libsimd_avx2_la-fast_parsimony_avx2.lo -MD -MP -MF .deps/libsimd_avx2_la-fast_parsimony_avx2.Tpo -c fast_parsimony_avx2.c -o libsimd_avx2_la-fast_parsimony_avx2.o >/dev/null 2>&1
--- libsimd_avx2_la-core_likelihood_avx2.lo ---
mv -f .deps/libsimd_avx2_la-core_likelihood_avx2.Tpo .deps/libsimd_avx2_la-core_likelihood_avx2.Plo
--- libsimd_avx_la-core_partials_avx.lo ---
/bin/bash ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I.. -I/usr/pkg/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -mavx -g -MT libsimd_avx_la-core_partials_avx.lo -MD -MP -MF .deps/libsimd_avx_la-core_partials_avx.Tpo -c -o libsimd_avx_la-core_partials_avx.lo `test -f 'core_partials_avx.c' || echo './'`core_partials_avx.c
libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I/home/pbulk/build/biology/libpll/work/.buildlink/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -mavx -g -MT libsimd_avx_la-core_partials_avx.lo -MD -MP -MF .deps/libsimd_avx_la-core_partials_avx.Tpo -c core_partials_avx.c -fPIC -DPIC -o .libs/libsimd_avx_la-core_partials_avx.o
--- libsimd_avx2_la-fast_parsimony_avx2.lo ---
mv -f .deps/libsimd_avx2_la-fast_parsimony_avx2.Tpo .deps/libsimd_avx2_la-fast_parsimony_avx2.Plo
--- libsimd_avx_la-core_derivatives_avx.lo ---
/bin/bash ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I.. -I/usr/pkg/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -mavx -g -MT libsimd_avx_la-core_derivatives_avx.lo -MD -MP -MF .deps/libsimd_avx_la-core_derivatives_avx.Tpo -c -o libsimd_avx_la-core_derivatives_avx.lo `test -f 'core_derivatives_avx.c' || echo './'`core_derivatives_avx.c
libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I/home/pbulk/build/biology/libpll/work/.buildlink/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -mavx -g -MT libsimd_avx_la-core_derivatives_avx.lo -MD -MP -MF .deps/libsimd_avx_la-core_derivatives_avx.Tpo -c core_derivatives_avx.c -fPIC -DPIC -o .libs/libsimd_avx_la-core_derivatives_avx.o
--- libsimd_avx_la-core_partials_avx.lo ---
libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I/home/pbulk/build/biology/libpll/work/.buildlink/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -mavx -g -MT libsimd_avx_la-core_partials_avx.lo -MD -MP -MF .deps/libsimd_avx_la-core_partials_avx.Tpo -c core_partials_avx.c -o libsimd_avx_la-core_partials_avx.o >/dev/null 2>&1
mv -f .deps/libsimd_avx_la-core_partials_avx.Tpo .deps/libsimd_avx_la-core_partials_avx.Plo
--- libsimd_avx_la-core_pmatrix_avx.lo ---
/bin/bash ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I.. -I/usr/pkg/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -mavx -g -MT libsimd_avx_la-core_pmatrix_avx.lo -MD -MP -MF .deps/libsimd_avx_la-core_pmatrix_avx.Tpo -c -o libsimd_avx_la-core_pmatrix_avx.lo `test -f 'core_pmatrix_avx.c' || echo './'`core_pmatrix_avx.c
--- libsimd_avx_la-core_derivatives_avx.lo ---
libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I/home/pbulk/build/biology/libpll/work/.buildlink/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -mavx -g -MT libsimd_avx_la-core_derivatives_avx.lo -MD -MP -MF .deps/libsimd_avx_la-core_derivatives_avx.Tpo -c core_derivatives_avx.c -o libsimd_avx_la-core_derivatives_avx.o >/dev/null 2>&1
--- libsimd_avx_la-core_pmatrix_avx.lo ---
libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I/home/pbulk/build/biology/libpll/work/.buildlink/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -mavx -g -MT libsimd_avx_la-core_pmatrix_avx.lo -MD -MP -MF .deps/libsimd_avx_la-core_pmatrix_avx.Tpo -c core_pmatrix_avx.c -fPIC -DPIC -o .libs/libsimd_avx_la-core_pmatrix_avx.o
libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I/home/pbulk/build/biology/libpll/work/.buildlink/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -mavx -g -MT libsimd_avx_la-core_pmatrix_avx.lo -MD -MP -MF .deps/libsimd_avx_la-core_pmatrix_avx.Tpo -c core_pmatrix_avx.c -o libsimd_avx_la-core_pmatrix_avx.o >/dev/null 2>&1
--- libsimd_avx_la-core_derivatives_avx.lo ---
mv -f .deps/libsimd_avx_la-core_derivatives_avx.Tpo .deps/libsimd_avx_la-core_derivatives_avx.Plo
--- libsimd_avx_la-core_likelihood_avx.lo ---
/bin/bash ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I.. -I/usr/pkg/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -mavx -g -MT libsimd_avx_la-core_likelihood_avx.lo -MD -MP -MF .deps/libsimd_avx_la-core_likelihood_avx.Tpo -c -o libsimd_avx_la-core_likelihood_avx.lo `test -f 'core_likelihood_avx.c' || echo './'`core_likelihood_avx.c
libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I/home/pbulk/build/biology/libpll/work/.buildlink/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -mavx -g -MT libsimd_avx_la-core_likelihood_avx.lo -MD -MP -MF .deps/libsimd_avx_la-core_likelihood_avx.Tpo -c core_likelihood_avx.c -fPIC -DPIC -o .libs/libsimd_avx_la-core_likelihood_avx.o
--- libsimd_avx_la-core_pmatrix_avx.lo ---
mv -f .deps/libsimd_avx_la-core_pmatrix_avx.Tpo .deps/libsimd_avx_la-core_pmatrix_avx.Plo
--- libsimd_avx_la-fast_parsimony_avx.lo ---
/bin/bash ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I.. -I/usr/pkg/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -mavx -g -MT libsimd_avx_la-fast_parsimony_avx.lo -MD -MP -MF .deps/libsimd_avx_la-fast_parsimony_avx.Tpo -c -o libsimd_avx_la-fast_parsimony_avx.lo `test -f 'fast_parsimony_avx.c' || echo './'`fast_parsimony_avx.c
libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I/home/pbulk/build/biology/libpll/work/.buildlink/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -mavx -g -MT libsimd_avx_la-fast_parsimony_avx.lo -MD -MP -MF .deps/libsimd_avx_la-fast_parsimony_avx.Tpo -c fast_parsimony_avx.c -fPIC -DPIC -o .libs/libsimd_avx_la-fast_parsimony_avx.o
--- libsimd_avx_la-core_likelihood_avx.lo ---
libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I/home/pbulk/build/biology/libpll/work/.buildlink/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -mavx -g -MT libsimd_avx_la-core_likelihood_avx.lo -MD -MP -MF .deps/libsimd_avx_la-core_likelihood_avx.Tpo -c core_likelihood_avx.c -o libsimd_avx_la-core_likelihood_avx.o >/dev/null 2>&1
--- libsimd_avx_la-fast_parsimony_avx.lo ---
libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I/home/pbulk/build/biology/libpll/work/.buildlink/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -mavx -g -MT libsimd_avx_la-fast_parsimony_avx.lo -MD -MP -MF .deps/libsimd_avx_la-fast_parsimony_avx.Tpo -c fast_parsimony_avx.c -o libsimd_avx_la-fast_parsimony_avx.o >/dev/null 2>&1
mv -f .deps/libsimd_avx_la-fast_parsimony_avx.Tpo .deps/libsimd_avx_la-fast_parsimony_avx.Plo
--- libsimd_sse_la-core_partials_sse.lo ---
/bin/bash ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I.. -I/usr/pkg/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -msse3 -g -MT libsimd_sse_la-core_partials_sse.lo -MD -MP -MF .deps/libsimd_sse_la-core_partials_sse.Tpo -c -o libsimd_sse_la-core_partials_sse.lo `test -f 'core_partials_sse.c' || echo './'`core_partials_sse.c
--- libsimd_avx_la-core_likelihood_avx.lo ---
mv -f .deps/libsimd_avx_la-core_likelihood_avx.Tpo .deps/libsimd_avx_la-core_likelihood_avx.Plo
--- libsimd_sse_la-core_derivatives_sse.lo ---
/bin/bash ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I.. -I/usr/pkg/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -msse3 -g -MT libsimd_sse_la-core_derivatives_sse.lo -MD -MP -MF .deps/libsimd_sse_la-core_derivatives_sse.Tpo -c -o libsimd_sse_la-core_derivatives_sse.lo `test -f 'core_derivatives_sse.c' || echo './'`core_derivatives_sse.c
--- libsimd_sse_la-core_partials_sse.lo ---
libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I/home/pbulk/build/biology/libpll/work/.buildlink/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -msse3 -g -MT libsimd_sse_la-core_partials_sse.lo -MD -MP -MF .deps/libsimd_sse_la-core_partials_sse.Tpo -c core_partials_sse.c -fPIC -DPIC -o .libs/libsimd_sse_la-core_partials_sse.o
--- libsimd_sse_la-core_derivatives_sse.lo ---
libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I/home/pbulk/build/biology/libpll/work/.buildlink/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -msse3 -g -MT libsimd_sse_la-core_derivatives_sse.lo -MD -MP -MF .deps/libsimd_sse_la-core_derivatives_sse.Tpo -c core_derivatives_sse.c -fPIC -DPIC -o .libs/libsimd_sse_la-core_derivatives_sse.o
--- libsimd_sse_la-core_partials_sse.lo ---
libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I/home/pbulk/build/biology/libpll/work/.buildlink/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -msse3 -g -MT libsimd_sse_la-core_partials_sse.lo -MD -MP -MF .deps/libsimd_sse_la-core_partials_sse.Tpo -c core_partials_sse.c -o libsimd_sse_la-core_partials_sse.o >/dev/null 2>&1
--- libsimd_sse_la-core_derivatives_sse.lo ---
libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I/home/pbulk/build/biology/libpll/work/.buildlink/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -msse3 -g -MT libsimd_sse_la-core_derivatives_sse.lo -MD -MP -MF .deps/libsimd_sse_la-core_derivatives_sse.Tpo -c core_derivatives_sse.c -o libsimd_sse_la-core_derivatives_sse.o >/dev/null 2>&1
mv -f .deps/libsimd_sse_la-core_derivatives_sse.Tpo .deps/libsimd_sse_la-core_derivatives_sse.Plo
--- libsimd_sse_la-core_likelihood_sse.lo ---
/bin/bash ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I.. -I/usr/pkg/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -msse3 -g -MT libsimd_sse_la-core_likelihood_sse.lo -MD -MP -MF .deps/libsimd_sse_la-core_likelihood_sse.Tpo -c -o libsimd_sse_la-core_likelihood_sse.lo `test -f 'core_likelihood_sse.c' || echo './'`core_likelihood_sse.c
libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I/home/pbulk/build/biology/libpll/work/.buildlink/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -msse3 -g -MT libsimd_sse_la-core_likelihood_sse.lo -MD -MP -MF .deps/libsimd_sse_la-core_likelihood_sse.Tpo -c core_likelihood_sse.c -fPIC -DPIC -o .libs/libsimd_sse_la-core_likelihood_sse.o
--- libsimd_sse_la-core_partials_sse.lo ---
mv -f .deps/libsimd_sse_la-core_partials_sse.Tpo .deps/libsimd_sse_la-core_partials_sse.Plo
--- libsimd_sse_la-core_pmatrix_sse.lo ---
/bin/bash ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I.. -I/usr/pkg/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -msse3 -g -MT libsimd_sse_la-core_pmatrix_sse.lo -MD -MP -MF .deps/libsimd_sse_la-core_pmatrix_sse.Tpo -c -o libsimd_sse_la-core_pmatrix_sse.lo `test -f 'core_pmatrix_sse.c' || echo './'`core_pmatrix_sse.c
libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I/home/pbulk/build/biology/libpll/work/.buildlink/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -msse3 -g -MT libsimd_sse_la-core_pmatrix_sse.lo -MD -MP -MF .deps/libsimd_sse_la-core_pmatrix_sse.Tpo -c core_pmatrix_sse.c -fPIC -DPIC -o .libs/libsimd_sse_la-core_pmatrix_sse.o
--- libsimd_sse_la-core_likelihood_sse.lo ---
libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I/home/pbulk/build/biology/libpll/work/.buildlink/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -msse3 -g -MT libsimd_sse_la-core_likelihood_sse.lo -MD -MP -MF .deps/libsimd_sse_la-core_likelihood_sse.Tpo -c core_likelihood_sse.c -o libsimd_sse_la-core_likelihood_sse.o >/dev/null 2>&1
--- libsimd_sse_la-core_pmatrix_sse.lo ---
libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I/home/pbulk/build/biology/libpll/work/.buildlink/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -msse3 -g -MT libsimd_sse_la-core_pmatrix_sse.lo -MD -MP -MF .deps/libsimd_sse_la-core_pmatrix_sse.Tpo -c core_pmatrix_sse.c -o libsimd_sse_la-core_pmatrix_sse.o >/dev/null 2>&1
--- libsimd_sse_la-core_likelihood_sse.lo ---
mv -f .deps/libsimd_sse_la-core_likelihood_sse.Tpo .deps/libsimd_sse_la-core_likelihood_sse.Plo
--- libsimd_sse_la-fast_parsimony_sse.lo ---
/bin/bash ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I.. -I/usr/pkg/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -msse3 -g -MT libsimd_sse_la-fast_parsimony_sse.lo -MD -MP -MF .deps/libsimd_sse_la-fast_parsimony_sse.Tpo -c -o libsimd_sse_la-fast_parsimony_sse.lo `test -f 'fast_parsimony_sse.c' || echo './'`fast_parsimony_sse.c
--- libsimd_sse_la-core_pmatrix_sse.lo ---
mv -f .deps/libsimd_sse_la-core_pmatrix_sse.Tpo .deps/libsimd_sse_la-core_pmatrix_sse.Plo
--- Makefile ---
cd .. && /bin/bash ./config.status src/Makefile depfiles
--- libsimd_sse_la-fast_parsimony_sse.lo ---
libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I/home/pbulk/build/biology/libpll/work/.buildlink/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -msse3 -g -MT libsimd_sse_la-fast_parsimony_sse.lo -MD -MP -MF .deps/libsimd_sse_la-fast_parsimony_sse.Tpo -c fast_parsimony_sse.c -fPIC -DPIC -o .libs/libsimd_sse_la-fast_parsimony_sse.o
--- Makefile ---
config.status: creating src/Makefile
config.status: executing depfiles commands
--- libpll_la-parse_utree.lo ---
/bin/bash ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I.. -I/usr/pkg/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g -MT libpll_la-parse_utree.lo -MD -MP -MF .deps/libpll_la-parse_utree.Tpo -c -o libpll_la-parse_utree.lo `test -f 'parse_utree.c' || echo './'`parse_utree.c
libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I/home/pbulk/build/biology/libpll/work/.buildlink/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g -MT libpll_la-parse_utree.lo -MD -MP -MF .deps/libpll_la-parse_utree.Tpo -c parse_utree.c -fPIC -DPIC -o .libs/libpll_la-parse_utree.o
--- libsimd_sse_la-fast_parsimony_sse.lo ---
libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I/home/pbulk/build/biology/libpll/work/.buildlink/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -msse3 -g -MT libsimd_sse_la-fast_parsimony_sse.lo -MD -MP -MF .deps/libsimd_sse_la-fast_parsimony_sse.Tpo -c fast_parsimony_sse.c -o libsimd_sse_la-fast_parsimony_sse.o >/dev/null 2>&1
mv -f .deps/libsimd_sse_la-fast_parsimony_sse.Tpo .deps/libsimd_sse_la-fast_parsimony_sse.Plo
--- libpll_la-parse_rtree.lo ---
/bin/bash ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I.. -I/usr/pkg/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g -MT libpll_la-parse_rtree.lo -MD -MP -MF .deps/libpll_la-parse_rtree.Tpo -c -o libpll_la-parse_rtree.lo `test -f 'parse_rtree.c' || echo './'`parse_rtree.c
libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I/home/pbulk/build/biology/libpll/work/.buildlink/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g -MT libpll_la-parse_rtree.lo -MD -MP -MF .deps/libpll_la-parse_rtree.Tpo -c parse_rtree.c -fPIC -DPIC -o .libs/libpll_la-parse_rtree.o
--- libpll_la-parse_utree.lo ---
libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I/home/pbulk/build/biology/libpll/work/.buildlink/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g -MT libpll_la-parse_utree.lo -MD -MP -MF .deps/libpll_la-parse_utree.Tpo -c parse_utree.c -o libpll_la-parse_utree.o >/dev/null 2>&1
--- libpll_la-parse_rtree.lo ---
libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I/home/pbulk/build/biology/libpll/work/.buildlink/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g -MT libpll_la-parse_rtree.lo -MD -MP -MF .deps/libpll_la-parse_rtree.Tpo -c parse_rtree.c -o libpll_la-parse_rtree.o >/dev/null 2>&1
--- libpll_la-parse_utree.lo ---
mv -f .deps/libpll_la-parse_utree.Tpo .deps/libpll_la-parse_utree.Plo
--- libpll_la-lex_utree.lo ---
/bin/bash ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I.. -I/usr/pkg/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g -MT libpll_la-lex_utree.lo -MD -MP -MF .deps/libpll_la-lex_utree.Tpo -c -o libpll_la-lex_utree.lo `test -f 'lex_utree.c' || echo './'`lex_utree.c
libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I/home/pbulk/build/biology/libpll/work/.buildlink/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g -MT libpll_la-lex_utree.lo -MD -MP -MF .deps/libpll_la-lex_utree.Tpo -c lex_utree.c -fPIC -DPIC -o .libs/libpll_la-lex_utree.o
--- libpll_la-parse_rtree.lo ---
mv -f .deps/libpll_la-parse_rtree.Tpo .deps/libpll_la-parse_rtree.Plo
--- libpll_la-lex_rtree.lo ---
/bin/bash ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I.. -I/usr/pkg/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g -MT libpll_la-lex_rtree.lo -MD -MP -MF .deps/libpll_la-lex_rtree.Tpo -c -o libpll_la-lex_rtree.lo `test -f 'lex_rtree.c' || echo './'`lex_rtree.c
libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I/home/pbulk/build/biology/libpll/work/.buildlink/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g -MT libpll_la-lex_rtree.lo -MD -MP -MF .deps/libpll_la-lex_rtree.Tpo -c lex_rtree.c -fPIC -DPIC -o .libs/libpll_la-lex_rtree.o
--- libpll_la-lex_utree.lo ---
libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I/home/pbulk/build/biology/libpll/work/.buildlink/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g -MT libpll_la-lex_utree.lo -MD -MP -MF .deps/libpll_la-lex_utree.Tpo -c lex_utree.c -o libpll_la-lex_utree.o >/dev/null 2>&1
mv -f .deps/libpll_la-lex_utree.Tpo .deps/libpll_la-lex_utree.Plo
--- libsimd_avx2.la ---
/bin/bash ../libtool --tag=CC --mode=link cc -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -mfma -mavx2 -g -Wl,-zrelro -L/usr/pkg/lib -Wl,-R/usr/pkg/lib -o libsimd_avx2.la libsimd_avx2_la-core_partials_avx2.lo libsimd_avx2_la-core_derivatives_avx2.lo libsimd_avx2_la-core_pmatrix_avx2.lo libsimd_avx2_la-core_likelihood_avx2.lo libsimd_avx2_la-fast_parsimony_avx2.lo -lm
--- libpll_la-lex_rtree.lo ---
libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I/home/pbulk/build/biology/libpll/work/.buildlink/include -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g -MT libpll_la-lex_rtree.lo -MD -MP -MF .deps/libpll_la-lex_rtree.Tpo -c lex_rtree.c -o libpll_la-lex_rtree.o >/dev/null 2>&1
--- libsimd_avx2.la ---
libtool: link: ar cr .libs/libsimd_avx2.a .libs/libsimd_avx2_la-core_partials_avx2.o .libs/libsimd_avx2_la-core_derivatives_avx2.o .libs/libsimd_avx2_la-core_pmatrix_avx2.o .libs/libsimd_avx2_la-core_likelihood_avx2.o .libs/libsimd_avx2_la-fast_parsimony_avx2.o
libtool: link: ranlib .libs/libsimd_avx2.a
libtool: link: ( cd ".libs" && rm -f "libsimd_avx2.la" && ln -s "../libsimd_avx2.la" "libsimd_avx2.la" )
--- libsimd_avx.la ---
/bin/bash ../libtool --tag=CC --mode=link cc -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -mavx -g -Wl,-zrelro -L/usr/pkg/lib -Wl,-R/usr/pkg/lib -o libsimd_avx.la libsimd_avx_la-core_partials_avx.lo libsimd_avx_la-core_derivatives_avx.lo libsimd_avx_la-core_pmatrix_avx.lo libsimd_avx_la-core_likelihood_avx.lo libsimd_avx_la-fast_parsimony_avx.lo -lm
libtool: link: ar cr .libs/libsimd_avx.a .libs/libsimd_avx_la-core_partials_avx.o .libs/libsimd_avx_la-core_derivatives_avx.o .libs/libsimd_avx_la-core_pmatrix_avx.o .libs/libsimd_avx_la-core_likelihood_avx.o .libs/libsimd_avx_la-fast_parsimony_avx.o
libtool: link: ranlib .libs/libsimd_avx.a
libtool: link: ( cd ".libs" && rm -f "libsimd_avx.la" && ln -s "../libsimd_avx.la" "libsimd_avx.la" )
--- libsimd_sse.la ---
/bin/bash ../libtool --tag=CC --mode=link cc -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -msse3 -g -Wl,-zrelro -L/usr/pkg/lib -Wl,-R/usr/pkg/lib -o libsimd_sse.la libsimd_sse_la-core_partials_sse.lo libsimd_sse_la-core_derivatives_sse.lo libsimd_sse_la-core_likelihood_sse.lo libsimd_sse_la-core_pmatrix_sse.lo libsimd_sse_la-fast_parsimony_sse.lo -lm
libtool: link: ar cr .libs/libsimd_sse.a .libs/libsimd_sse_la-core_partials_sse.o .libs/libsimd_sse_la-core_derivatives_sse.o .libs/libsimd_sse_la-core_likelihood_sse.o .libs/libsimd_sse_la-core_pmatrix_sse.o .libs/libsimd_sse_la-fast_parsimony_sse.o
libtool: link: ranlib .libs/libsimd_sse.a
libtool: link: ( cd ".libs" && rm -f "libsimd_sse.la" && ln -s "../libsimd_sse.la" "libsimd_sse.la" )
--- libpll_la-lex_rtree.lo ---
mv -f .deps/libpll_la-lex_rtree.Tpo .deps/libpll_la-lex_rtree.Plo
--- libpll.la ---
/bin/bash ../libtool --tag=CC --mode=link cc -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC -g -version-info 0:0:0 -Wl,-zrelro -L/usr/pkg/lib -Wl,-R/usr/pkg/lib -o libpll.la -rpath /usr/pkg/lib libpll_la-fasta.lo libpll_la-gamma.lo libpll_la-likelihood.lo libpll_la-list.lo libpll_la-maps.lo libpll_la-models.lo libpll_la-pll.lo libpll_la-output.lo libpll_la-utree.lo libpll_la-rtree.lo libpll_la-derivatives.lo libpll_la-partials.lo libpll_la-compress.lo libpll_la-utree_moves.lo libpll_la-utree_svg.lo libpll_la-parsimony.lo libpll_la-core_derivatives.lo libpll_la-core_partials.lo libpll_la-core_pmatrix.lo libpll_la-core_likelihood.lo libpll_la-parse_utree.lo libpll_la-parse_rtree.lo libpll_la-lex_utree.lo libpll_la-lex_rtree.lo libpll_la-fast_parsimony.lo libpll_la-stepwise.lo libpll_la-random.lo libpll_la-phylip.lo libpll_la-hardware.lo libsimd_avx2.la libsimd_avx.la libsimd_sse.la -lm
libtool: link: cc -shared -fPIC -DPIC .libs/libpll_la-fasta.o .libs/libpll_la-gamma.o .libs/libpll_la-likelihood.o .libs/libpll_la-list.o .libs/libpll_la-maps.o .libs/libpll_la-models.o .libs/libpll_la-pll.o .libs/libpll_la-output.o .libs/libpll_la-utree.o .libs/libpll_la-rtree.o .libs/libpll_la-derivatives.o .libs/libpll_la-partials.o .libs/libpll_la-compress.o .libs/libpll_la-utree_moves.o .libs/libpll_la-utree_svg.o .libs/libpll_la-parsimony.o .libs/libpll_la-core_derivatives.o .libs/libpll_la-core_partials.o .libs/libpll_la-core_pmatrix.o .libs/libpll_la-core_likelihood.o .libs/libpll_la-parse_utree.o .libs/libpll_la-parse_rtree.o .libs/libpll_la-lex_utree.o .libs/libpll_la-lex_rtree.o .libs/libpll_la-fast_parsimony.o .libs/libpll_la-stepwise.o .libs/libpll_la-random.o .libs/libpll_la-phylip.o .libs/libpll_la-hardware.o -Wl,--whole-archive ./.libs/libsimd_avx2.a ./.libs/libsimd_avx.a ./.libs/libsimd_sse.a -Wl,--no-whole-archive -L/home/pbulk/build/biology/libpll/work/.buildlink/lib -lm -O3 -g -Wl,-zrelro -Wl,-rpath -Wl,/usr/pkg/lib -Wl,-soname -Wl,libpll.so.0 -o .libs/libpll.so.0.0.0
libtool: link: (cd ".libs" && rm -f "libpll.so.0" && ln -s "libpll.so.0.0.0" "libpll.so.0")
libtool: link: (cd ".libs" && rm -f "libpll.so" && ln -s "libpll.so.0.0.0" "libpll.so")
libtool: link: (cd .libs/libpll.lax/libsimd_avx2.a && ar x "/home/pbulk/build/biology/libpll/work/libpll-src-0.3.2/src/./.libs/libsimd_avx2.a")
libtool: link: (cd .libs/libpll.lax/libsimd_avx.a && ar x "/home/pbulk/build/biology/libpll/work/libpll-src-0.3.2/src/./.libs/libsimd_avx.a")
libtool: link: (cd .libs/libpll.lax/libsimd_sse.a && ar x "/home/pbulk/build/biology/libpll/work/libpll-src-0.3.2/src/./.libs/libsimd_sse.a")
libtool: link: ar cr .libs/libpll.a libpll_la-fasta.o libpll_la-gamma.o libpll_la-likelihood.o libpll_la-list.o libpll_la-maps.o libpll_la-models.o libpll_la-pll.o libpll_la-output.o libpll_la-utree.o libpll_la-rtree.o libpll_la-derivatives.o libpll_la-partials.o libpll_la-compress.o libpll_la-utree_moves.o libpll_la-utree_svg.o libpll_la-parsimony.o libpll_la-core_derivatives.o libpll_la-core_partials.o libpll_la-core_pmatrix.o libpll_la-core_likelihood.o libpll_la-parse_utree.o libpll_la-parse_rtree.o libpll_la-lex_utree.o libpll_la-lex_rtree.o libpll_la-fast_parsimony.o libpll_la-stepwise.o libpll_la-random.o libpll_la-phylip.o libpll_la-hardware.o .libs/libpll.lax/libsimd_avx2.a/libsimd_avx2_la-core_derivatives_avx2.o .libs/libpll.lax/libsimd_avx2.a/libsimd_avx2_la-core_likelihood_avx2.o .libs/libpll.lax/libsimd_avx2.a/libsimd_avx2_la-core_partials_avx2.o .libs/libpll.lax/libsimd_avx2.a/libsimd_avx2_la-core_pmatrix_avx2.o .libs/libpll.lax/libsimd_avx2.a/libsimd_avx2_la-fast_parsimony_avx2.o .libs/libpll.lax/libsimd_avx.a/libsimd_avx_la-core_derivatives_avx.o .libs/libpll.lax/libsimd_avx.a/libsimd_avx_la-core_likelihood_avx.o .libs/libpll.lax/libsimd_avx.a/libsimd_avx_la-core_partials_avx.o .libs/libpll.lax/libsimd_avx.a/libsimd_avx_la-core_pmatrix_avx.o .libs/libpll.lax/libsimd_avx.a/libsimd_avx_la-fast_parsimony_avx.o .libs/libpll.lax/libsimd_sse.a/libsimd_sse_la-core_derivatives_sse.o .libs/libpll.lax/libsimd_sse.a/libsimd_sse_la-core_likelihood_sse.o .libs/libpll.lax/libsimd_sse.a/libsimd_sse_la-core_partials_sse.o .libs/libpll.lax/libsimd_sse.a/libsimd_sse_la-core_pmatrix_sse.o .libs/libpll.lax/libsimd_sse.a/libsimd_sse_la-fast_parsimony_sse.o
libtool: link: ranlib .libs/libpll.a
libtool: link: rm -fr .libs/libpll.lax
libtool: link: ( cd ".libs" && rm -f "libpll.la" && ln -s "../libpll.la" "libpll.la" )
Making all in man
--- ../config.status ---
cd .. && /usr/pkg/bin/bmake am--refresh
--- ./config.status ---
/bin/bash ./config.status --recheck
--- am--refresh ---
--- Makefile ---
cd .. && /bin/bash ./config.status man/Makefile
config.status: creating man/Makefile
Making all in examples
--- ../config.status ---
cd .. && /usr/pkg/bin/bmake am--refresh
--- ./config.status ---
/bin/bash ./config.status --recheck
--- am--refresh ---
--- Makefile ---
cd .. && /bin/bash ./config.status examples/Makefile
config.status: creating examples/Makefile
--- ./config.status ---
/bin/bash ./config.status --recheck
--- config.h ---