+ case "${usergroup_phase}" in
+ local run_cmd
+ run_cmd=run_su
+ shift
+ run_su /usr/pkg/bin/bmake stage-install BATCH=1 DEPENDS_TARGET=/nonexistent WRKLOG=/tmp/bulklog/R-compositions-2.0.7/work.log
+ su pbulk -c '"$@"' make /usr/pkg/bin/bmake stage-install BATCH=1 DEPENDS_TARGET=/nonexistent WRKLOG=/tmp/bulklog/R-compositions-2.0.7/work.log
=> Bootstrap dependency digest>=20211023: found digest-20220214
===> Installing for R-compositions-2.0.7
=> Generating pre-install file lists
=> Creating installation directories
* installing *source* package 'compositions' ...
** package 'compositions' successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: 'gcc (GCC) 8.5.0 20210514 (Red Hat 8.5.0-20)'
cc -I"/usr/pkg/lib/R/include" -DNDEBUG   -I/usr/pkg/include -I/usr/include -I/usr/pkg/include/glib-2.0 -I/usr/pkg/include/gio-unix-2.0 -I/usr/pkg/lib/glib-2.0/include -I/usr/pkg/include/freetype2 -I/usr/pkg/include/harfbuzz -I/usr/pkg/include/ncurses -DLDAP_DEPRECATED    -fpic  -pipe -O2 -pthread -I/usr/pkg/include -I/usr/include -I/usr/pkg/include/glib-2.0 -I/usr/pkg/include/gio-unix-2.0 -I/usr/pkg/lib/glib-2.0/include -I/usr/pkg/include/freetype2 -I/usr/pkg/include/harfbuzz -I/usr/pkg/include/ncurses -DLDAP_DEPRECATED  -c compositions.c -o compositions.o
cc -shared -Wl,-R/usr/pkg/lib/R/lib -L/usr/pkg/lib/R/lib -Wl,-zrelro -L/usr/pkg/lib -Wl,-R/usr/pkg/lib -L/usr/lib64 -Wl,-R/usr/lib64 -pthread -o compositions.so compositions.o -llapack -lblas -lblas -lgfortran -lm -lquadmath -lpthread -Wl,-R/usr/pkg/lib/R/lib -L/usr/pkg/lib/R/lib -lR
installing to /home/pbulk/build/math/R-compositions/work/.destdir/usr/pkg/lib/R/library/00LOCK-compositions/00new/compositions/libs
** R
** data
** demo
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (compositions)
=> Automatic manual page handling
=> Generating post-install file lists
=> Checking file-check results for R-compositions-2.0.7
=> Checking for non-existent script interpreters in R-compositions-2.0.7
=> Checking file permissions in R-compositions-2.0.7
=> Checking for RELRO in R-compositions-2.0.7
=> Checking for missing run-time search paths in R-compositions-2.0.7
=> Checking for work-directory references in R-compositions-2.0.7