+ case "${usergroup_phase}" in
+ local run_cmd
+ run_cmd=run_su
+ shift
+ run_su /usr/pkg/bin/bmake stage-install BATCH=1 DEPENDS_TARGET=/nonexistent WRKLOG=/tmp/bulklog/openbabel-3.1.1nb23/work.log
+ su pbulk -c '"$@"' make /usr/pkg/bin/bmake stage-install BATCH=1 DEPENDS_TARGET=/nonexistent WRKLOG=/tmp/bulklog/openbabel-3.1.1nb23/work.log
=> Bootstrap dependency digest>=20211023: found digest-20220214
===> Installing for openbabel-3.1.1nb23
=> Generating pre-install file lists
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Installing the project stripped...
-- Install configuration: "Release"
-- Installing: /home/pbulk/build/biology/openbabel/work/.destdir/usr/pkg/include/openbabel3/openbabel/babelconfig.h
-- Installing: /home/pbulk/build/biology/openbabel/work/.destdir/usr/pkg/lib/pkgconfig/openbabel-3.pc
-- Installing: /home/pbulk/build/biology/openbabel/work/.destdir/usr/pkg/lib/cmake/openbabel3/OpenBabel3_EXPORTS.cmake
-- Installing: /home/pbulk/build/biology/openbabel/work/.destdir/usr/pkg/lib/cmake/openbabel3/OpenBabel3_EXPORTS-release.cmake
-- Installing: /home/pbulk/build/biology/openbabel/work/.destdir/usr/pkg/lib/cmake/openbabel3/OpenBabel3Config.cmake
-- Installing: /home/pbulk/build/biology/openbabel/work/.destdir/usr/pkg/lib/cmake/openbabel3/OpenBabel3ConfigVersion.cmake
-- Installing: /home/pbulk/build/biology/openbabel/work/.destdir/usr/pkg/include/inchi/inchi_api.h
-- Installing: /home/pbulk/build/biology/openbabel/work/.destdir/usr/pkg/include/openbabel3/openbabel/chemdrawcdx.h
-- Installing: /home/pbulk/build/biology/openbabel/work/.destdir/usr/pkg/include/openbabel3/openbabel/alias.h
-- Installing: /home/pbulk/build/biology/openbabel/work/.destdir/usr/pkg/include/openbabel3/openbabel/atom.h
-- Installing: /home/pbulk/build/biology/openbabel/work/.destdir/usr/pkg/include/openbabel3/openbabel/base.h
-- Installing: /home/pbulk/build/biology/openbabel/work/.destdir/usr/pkg/include/openbabel3/openbabel/bitvec.h
-- Installing: /home/pbulk/build/biology/openbabel/work/.destdir/usr/pkg/include/openbabel3/openbabel/bond.h
-- Installing: /home/pbulk/build/biology/openbabel/work/.destdir/usr/pkg/include/openbabel3/openbabel/bondtyper.h
-- Installing: /home/pbulk/build/biology/openbabel/work/.destdir/usr/pkg/include/openbabel3/openbabel/builder.h
-- Installing: /home/pbulk/build/biology/openbabel/work/.destdir/usr/pkg/include/openbabel3/openbabel/canon.h
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-- Installing: /home/pbulk/build/biology/openbabel/work/.destdir/usr/pkg/include/openbabel3/openbabel/chargemodel.h
-- Installing: /home/pbulk/build/biology/openbabel/work/.destdir/usr/pkg/include/openbabel3/openbabel/conformersearch.h
-- Installing: /home/pbulk/build/biology/openbabel/work/.destdir/usr/pkg/include/openbabel3/openbabel/data.h
-- Installing: /home/pbulk/build/biology/openbabel/work/.destdir/usr/pkg/include/openbabel3/openbabel/data_utilities.h
-- Installing: /home/pbulk/build/biology/openbabel/work/.destdir/usr/pkg/include/openbabel3/openbabel/descriptor.h
-- Installing: /home/pbulk/build/biology/openbabel/work/.destdir/usr/pkg/include/openbabel3/openbabel/distgeom.h
-- Installing: /home/pbulk/build/biology/openbabel/work/.destdir/usr/pkg/include/openbabel3/openbabel/dlhandler.h
-- Installing: /home/pbulk/build/biology/openbabel/work/.destdir/usr/pkg/include/openbabel3/openbabel/elements.h
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-- Installing: /home/pbulk/build/biology/openbabel/work/.destdir/usr/pkg/include/openbabel3/openbabel/format.h
-- Installing: /home/pbulk/build/biology/openbabel/work/.destdir/usr/pkg/include/openbabel3/openbabel/generic.h
-- Installing: /home/pbulk/build/biology/openbabel/work/.destdir/usr/pkg/include/openbabel3/openbabel/graphsym.h
-- Installing: /home/pbulk/build/biology/openbabel/work/.destdir/usr/pkg/include/openbabel3/openbabel/grid.h
-- Installing: /home/pbulk/build/biology/openbabel/work/.destdir/usr/pkg/include/openbabel3/openbabel/griddata.h
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-- Installing: /home/pbulk/build/biology/openbabel/work/.destdir/usr/pkg/share/openbabel/3.1.0/atomization-energies.txt
-- Installing: /home/pbulk/build/biology/openbabel/work/.destdir/usr/pkg/share/openbabel/3.1.0/atomtyp.txt
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-- Installing: /home/pbulk/build/biology/openbabel/work/.destdir/usr/pkg/share/openbabel/3.1.0/superatom.txt
-- Installing: /home/pbulk/build/biology/openbabel/work/.destdir/usr/pkg/share/openbabel/3.1.0/svgformat.script
-- Installing: /home/pbulk/build/biology/openbabel/work/.destdir/usr/pkg/share/openbabel/3.1.0/templates.sdf
-- Installing: /home/pbulk/build/biology/openbabel/work/.destdir/usr/pkg/share/openbabel/3.1.0/torlib.txt
-- Installing: /home/pbulk/build/biology/openbabel/work/.destdir/usr/pkg/share/openbabel/3.1.0/torsion.txt
-- Installing: /home/pbulk/build/biology/openbabel/work/.destdir/usr/pkg/share/openbabel/3.1.0/types.txt
-- Installing: /home/pbulk/build/biology/openbabel/work/.destdir/usr/pkg/share/openbabel/3.1.0/UFF.prm
-- Installing: /home/pbulk/build/biology/openbabel/work/.destdir/usr/pkg/man/man1/obabel.1
-- Installing: /home/pbulk/build/biology/openbabel/work/.destdir/usr/pkg/man/man1/obchiral.1
-- Installing: /home/pbulk/build/biology/openbabel/work/.destdir/usr/pkg/man/man1/obconformer.1
-- Installing: /home/pbulk/build/biology/openbabel/work/.destdir/usr/pkg/man/man1/obdistgen.1
-- Installing: /home/pbulk/build/biology/openbabel/work/.destdir/usr/pkg/man/man1/obenergy.1
-- Installing: /home/pbulk/build/biology/openbabel/work/.destdir/usr/pkg/man/man1/obfit.1
-- Installing: /home/pbulk/build/biology/openbabel/work/.destdir/usr/pkg/man/man1/obgen.1
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-- Installing: /home/pbulk/build/biology/openbabel/work/.destdir/usr/pkg/man/man1/obminimize.1
-- Installing: /home/pbulk/build/biology/openbabel/work/.destdir/usr/pkg/man/man1/obprobe.1
-- Installing: /home/pbulk/build/biology/openbabel/work/.destdir/usr/pkg/man/man1/obprop.1
-- Installing: /home/pbulk/build/biology/openbabel/work/.destdir/usr/pkg/man/man1/obrms.1
-- Installing: /home/pbulk/build/biology/openbabel/work/.destdir/usr/pkg/man/man1/obrotamer.1
-- Installing: /home/pbulk/build/biology/openbabel/work/.destdir/usr/pkg/man/man1/obrotate.1
-- Installing: /home/pbulk/build/biology/openbabel/work/.destdir/usr/pkg/man/man1/obspectrophore.1
-- Installing: /home/pbulk/build/biology/openbabel/work/.destdir/usr/pkg/man/man1/obsym.1
-- Installing: /home/pbulk/build/biology/openbabel/work/.destdir/usr/pkg/man/man1/obtautomer.1
-- Installing: /home/pbulk/build/biology/openbabel/work/.destdir/usr/pkg/man/man1/obthermo.1
-- Installing: /home/pbulk/build/biology/openbabel/work/.destdir/usr/pkg/man/man1/roundtrip.1
-- Installing: /home/pbulk/build/biology/openbabel/work/.destdir/usr/pkg/share/openbabel/3.1.0/splash.png
-- Installing: /home/pbulk/build/biology/openbabel/work/.destdir/usr/pkg/lib/libopenbabel.so.7.0.0
-- Installing: /home/pbulk/build/biology/openbabel/work/.destdir/usr/pkg/lib/libopenbabel.so.7
-- Installing: /home/pbulk/build/biology/openbabel/work/.destdir/usr/pkg/lib/libopenbabel.so
-- Installing: /home/pbulk/build/biology/openbabel/work/.destdir/usr/pkg/lib/openbabel/3.1.0/plugin_descriptors.so
-- Installing: /home/pbulk/build/biology/openbabel/work/.destdir/usr/pkg/lib/openbabel/3.1.0/plugin_fingerprints.so
-- Installing: /home/pbulk/build/biology/openbabel/work/.destdir/usr/pkg/lib/openbabel/3.1.0/plugin_forcefields.so
-- Installing: /home/pbulk/build/biology/openbabel/work/.destdir/usr/pkg/lib/openbabel/3.1.0/plugin_ops.so
-- Installing: /home/pbulk/build/biology/openbabel/work/.destdir/usr/pkg/lib/openbabel/3.1.0/plugin_charges.so
-- Installing: /home/pbulk/build/biology/openbabel/work/.destdir/usr/pkg/lib/openbabel/3.1.0/smilesformat.so
-- Installing: /home/pbulk/build/biology/openbabel/work/.destdir/usr/pkg/lib/openbabel/3.1.0/mdlformat.so
-- Installing: /home/pbulk/build/biology/openbabel/work/.destdir/usr/pkg/lib/openbabel/3.1.0/mol2format.so
-- Installing: /home/pbulk/build/biology/openbabel/work/.destdir/usr/pkg/lib/openbabel/3.1.0/pdbformat.so
-- Installing: /home/pbulk/build/biology/openbabel/work/.destdir/usr/pkg/lib/openbabel/3.1.0/inchiformat.so
-- Installing: /home/pbulk/build/biology/openbabel/work/.destdir/usr/pkg/lib/openbabel/3.1.0/asciiformat.so
-- Installing: /home/pbulk/build/biology/openbabel/work/.destdir/usr/pkg/lib/openbabel/3.1.0/copyformat.so
-- Installing: /home/pbulk/build/biology/openbabel/work/.destdir/usr/pkg/lib/openbabel/3.1.0/MNAformat.so
-- Installing: /home/pbulk/build/biology/openbabel/work/.destdir/usr/pkg/lib/openbabel/3.1.0/molreport.so
-- Installing: /home/pbulk/build/biology/openbabel/work/.destdir/usr/pkg/lib/openbabel/3.1.0/nulformat.so
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-- Installing: /home/pbulk/build/biology/openbabel/work/.destdir/usr/pkg/lib/openbabel/3.1.0/svgformat.so
-- Installing: /home/pbulk/build/biology/openbabel/work/.destdir/usr/pkg/lib/openbabel/3.1.0/textformat.so
-- Installing: /home/pbulk/build/biology/openbabel/work/.destdir/usr/pkg/lib/openbabel/3.1.0/titleformat.so
-- Installing: /home/pbulk/build/biology/openbabel/work/.destdir/usr/pkg/lib/openbabel/3.1.0/confabreport.so
-- Installing: /home/pbulk/build/biology/openbabel/work/.destdir/usr/pkg/lib/openbabel/3.1.0/pngformat.so
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-- Installing: /home/pbulk/build/biology/openbabel/work/.destdir/usr/pkg/lib/libinchi.so.0.4.1
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-- Installing: /home/pbulk/build/biology/openbabel/work/.destdir/usr/pkg/bin/obminimize
-- Installing: /home/pbulk/build/biology/openbabel/work/.destdir/usr/pkg/bin/obmm
-- Installing: /home/pbulk/build/biology/openbabel/work/.destdir/usr/pkg/bin/obprobe
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-- Installing: /home/pbulk/build/biology/openbabel/work/.destdir/usr/pkg/bin/obtautomer
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-- Installing: /home/pbulk/build/biology/openbabel/work/.destdir/usr/pkg/bin/obdistgen
-- Installing: /home/pbulk/build/biology/openbabel/work/.destdir/usr/pkg/bin/obgrep
-- Installing: /home/pbulk/build/biology/openbabel/work/.destdir/usr/pkg/bin/obspectrophore
-- Installing: /home/pbulk/build/biology/openbabel/work/.destdir/usr/pkg/bin/obrms
-- Installing: /home/pbulk/build/biology/openbabel/work/.destdir/usr/pkg/bin/roundtrip
=> Automatic manual page handling
=> Generating post-install file lists
=> Checking file-check results for openbabel-3.1.1nb23
ERROR: ************************************************************
ERROR: The following files are in /home/pbulk/build/biology/openbabel/work/.destdir/usr/pkg but not in the PLIST:
ERROR:         /home/pbulk/build/biology/openbabel/work/.destdir/usr/pkg/lib/openbabel/3.1.0/xtcformat.so
*** Error code 1

Stop.
bmake[1]: stopped in /data/jenkins/workspace/pkgsrc-el7-trunk-x86_64/biology/openbabel
*** Error code 1

Stop.
bmake: stopped in /data/jenkins/workspace/pkgsrc-el7-trunk-x86_64/biology/openbabel