+ case "${usergroup_phase}" in
+ local run_cmd
+ run_cmd=run_su
+ shift
+ run_su /usr/pkg/bin/bmake configure BATCH=1 DEPENDS_TARGET=/nonexistent WRKLOG=/tmp/bulklog/R-RNetCDF-2.6.2nb2/work.log
+ su pbulk -c '"$@"' make /usr/pkg/bin/bmake configure BATCH=1 DEPENDS_TARGET=/nonexistent WRKLOG=/tmp/bulklog/R-RNetCDF-2.6.2nb2/work.log
=> Bootstrap dependency digest>=20211023: found digest-20220214
=> Checksum BLAKE2s OK for R/RNetCDF_2.6-2.tar.gz
=> Checksum SHA512 OK for R/RNetCDF_2.6-2.tar.gz
===> Installing dependencies for R-RNetCDF-2.6.2nb2
==========================================================================
The following variables will affect the build process of this package,
R-RNetCDF-2.6.2nb2.  Their current value is shown below:

        * PKGSRC_BLAS_TYPES = netlib openblas openblas_pthread openblas_openmp
        * SSLBASE (defined)
        * SSLCERTBUNDLE (not defined)
        * SSLCERTS = /usr/pkg/etc/openssl/certs
        * SSLDIR = /usr/pkg/etc/openssl
        * SSLKEYS = /usr/pkg/etc/openssl/private

Based on these variables, the following variables have been set:

        * BLAS_INCLUDES (not defined)
        * BLAS_LIBS = -lblas
        * BLAS_TYPE = netlib
        * CBLAS_LIBS = -lcblas -lblas
        * LAPACKE_LIBS = -llapacke -llapack -lblas
        * LAPACK_LIBS = -llapack -lblas

You may want to abort the process now with CTRL-C and change the value
of variables in the first group before continuing.  Be sure to run
`/usr/pkg/bin/bmake clean' after the changes.
==========================================================================
=> Tool dependency mktools-[0-9]*: found mktools-20220614
=> Tool dependency nbpatch-[0-9]*: found nbpatch-20151107
=> Tool dependency cwrappers>=20150314: found cwrappers-20220403
=> Tool dependency checkperms>=1.1: found checkperms-1.12
=> Full dependency R>=4.2.0nb1: found R-4.2.0nb12
=> Full dependency netcdf>=4.9.2nb2: found netcdf-4.9.2nb2
=> Full dependency udunits>=2.2.26: found udunits-2.2.26
===> Overriding tools for R-RNetCDF-2.6.2nb2
===> Extracting for R-RNetCDF-2.6.2nb2
===> Patching for R-RNetCDF-2.6.2nb2
=> Applying pkgsrc patches for R-RNetCDF-2.6.2nb2
=> Verifying /data/jenkins/workspace/pkgsrc-el7-trunk-x86_64/math/R-RNetCDF/patches/patch-configure
=> Applying pkgsrc patch /data/jenkins/workspace/pkgsrc-el7-trunk-x86_64/math/R-RNetCDF/patches/patch-configure
Hmm...  Looks like a unified diff to me...
The text leading up to this was:
--------------------------
|$NetBSD: patch-configure,v 1.3 2021/09/19 02:55:21 mef Exp $
|
|Fix the use of == in shell scripts.
|
|--- configure.orig	2021-08-20 17:07:16.000000000 +0900
|+++ configure	2021-09-19 11:44:01.660453490 +0900
--------------------------
Patching file configure using Plan A...
Hunk #1 succeeded at 3718.
Hunk #2 succeeded at 4064.
done
===> Creating toolchain wrappers for R-RNetCDF-2.6.2nb2
===> Configuring for R-RNetCDF-2.6.2nb2
=> Checking for portability problems in extracted files