+ case "${usergroup_phase}" in
+ local run_cmd
+ run_cmd=run_su
+ shift
+ run_su /usr/pkg/bin/bmake configure BATCH=1 DEPENDS_TARGET=/nonexistent WRKLOG=/tmp/bulklog/rasmol-2.7.3nb2/work.log
+ su pbulk -c '"$@"' make /usr/pkg/bin/bmake configure BATCH=1 DEPENDS_TARGET=/nonexistent WRKLOG=/tmp/bulklog/rasmol-2.7.3nb2/work.log
=> Bootstrap dependency digest>=20211023: found digest-20220214
WARNING: [license.mk] Every package should define a LICENSE.
=> Checksum BLAKE2s OK for RasMol_2.7.3.tar.gz
=> Checksum SHA512 OK for RasMol_2.7.3.tar.gz
===> Installing dependencies for rasmol-2.7.3nb2
=> Tool dependency mktools-[0-9]*: found mktools-20220614
=> Tool dependency imake-[0-9]*: found imake-1.0.9
=> Tool dependency nbpatch-[0-9]*: found nbpatch-20151107
=> Tool dependency cwrappers>=20150314: found cwrappers-20220403
=> Tool dependency checkperms>=1.1: found checkperms-1.12
=> Build dependency xorgproto>=2016.1: found xorgproto-2023.2
=> Build dependency xcb-proto>=1.4: found xcb-proto-1.15.2nb2
=> Full dependency libXext>=1.1: found libXext-1.3.5
=> Full dependency libXi>=1.0.0: found libXi-1.8.1
===> Overriding tools for rasmol-2.7.3nb2
===> Extracting for rasmol-2.7.3nb2
cd /home/pbulk/build/biology/rasmol/work/RasMol_2.7.3/src && /bin/rm -rf RCS doc/RCS src/RCS src/msc/RCS
===> Patching for rasmol-2.7.3nb2
=> Applying pkgsrc patches for rasmol-2.7.3nb2
=> Verifying /data/jenkins/workspace/pkgsrc-el7-trunk-x86_64/biology/rasmol/patches/patch-aa
=> Applying pkgsrc patch /data/jenkins/workspace/pkgsrc-el7-trunk-x86_64/biology/rasmol/patches/patch-aa
Hmm...  Looks like a unified diff to me...
The text leading up to this was:
--------------------------
|$NetBSD: patch-aa,v 1.2 2005/10/07 15:13:21 perry Exp $
|
|--- Imakefile.orig	2005-10-06 17:57:49.000000000 -0400
|+++ Imakefile	2005-10-06 18:01:41.000000000 -0400
--------------------------
Patching file Imakefile using Plan A...
Hunk #1 succeeded at 92.
Hunk #2 succeeded at 108.
Hunk #3 succeeded at 177.
done
=> Verifying /data/jenkins/workspace/pkgsrc-el7-trunk-x86_64/biology/rasmol/patches/patch-ab
=> Applying pkgsrc patch /data/jenkins/workspace/pkgsrc-el7-trunk-x86_64/biology/rasmol/patches/patch-ab
Hmm...  Looks like a unified diff to me...
The text leading up to this was:
--------------------------
|$NetBSD: patch-ab,v 1.2 2005/10/07 15:13:21 perry Exp $
|
|--- cif_ctonum.c.orig	2005-10-06 18:05:48.000000000 -0400
|+++ cif_ctonum.c	2005-10-06 18:07:54.000000000 -0400
--------------------------
Patching file cif_ctonum.c using Plan A...
Hunk #1 succeeded at 173.
done
=> Verifying /data/jenkins/workspace/pkgsrc-el7-trunk-x86_64/biology/rasmol/patches/patch-ac
=> Applying pkgsrc patch /data/jenkins/workspace/pkgsrc-el7-trunk-x86_64/biology/rasmol/patches/patch-ac
Hmm...  Looks like a unified diff to me...
The text leading up to this was:
--------------------------
|$NetBSD: patch-ac,v 1.3 2005/10/31 17:53:26 tv Exp $
|
|--- rasmol.h.orig	2005-04-28 18:57:25.000000000 -0400
|+++ rasmol.h
--------------------------
Patching file rasmol.h using Plan A...
Hunk #1 succeeded at 71.
Hunk #2 succeeded at 113.
done
===> Creating toolchain wrappers for rasmol-2.7.3nb2
===> Configuring for rasmol-2.7.3nb2
/bin/ln -sf /home/pbulk/build/biology/rasmol/work/RasMol_2.7.3/doc  /home/pbulk/build/biology/rasmol/work/RasMol_2.7.3/src
/bin/ln -sf /home/pbulk/build/biology/rasmol/work/RasMol_2.7.3/data /home/pbulk/build/biology/rasmol/work/RasMol_2.7.3/src
cd /home/pbulk/build/biology/rasmol/work/RasMol_2.7.3/src && /bin/sed "s#@@PREFIX@@#/usr/pkg#" rasmol.h >  rasmol.h.new && /bin/mv rasmol.h.new rasmol.h
=> Checking for portability problems in extracted files