+ case "${usergroup_phase}" in + local run_cmd + run_cmd=run_su + shift + run_su /usr/pkg/bin/bmake configure BATCH=1 DEPENDS_TARGET=/nonexistent WRKLOG=/tmp/bulklog/netcdf-cxx-4.3.1/work.log + su pbulk -c '"$@"' make /usr/pkg/bin/bmake configure BATCH=1 DEPENDS_TARGET=/nonexistent WRKLOG=/tmp/bulklog/netcdf-cxx-4.3.1/work.log => Bootstrap dependency digest>=20211023: found digest-20220214 WARNING: [license.mk] Every package should define a LICENSE. => Checksum BLAKE2s OK for netcdf-cxx4-4.3.1.tar.gz => Checksum SHA512 OK for netcdf-cxx4-4.3.1.tar.gz ===> Installing dependencies for netcdf-cxx-4.3.1 ========================================================================== The following variables will affect the build process of this package, netcdf-cxx-4.3.1. Their current value is shown below: * SSLBASE (defined) * SSLCERTBUNDLE (not defined) * SSLCERTS = /usr/pkg/etc/openssl/certs * SSLDIR = /usr/pkg/etc/openssl * SSLKEYS = /usr/pkg/etc/openssl/private You may want to abort the process now with CTRL-C and change the value of variables in the first group before continuing. Be sure to run `/usr/pkg/bin/bmake clean' after the changes. ========================================================================== => Tool dependency libtool-base>=2.4.2nb9: found libtool-base-2.4.7nb1 => Tool dependency mktools-[0-9]*: found mktools-20220614 => Tool dependency cwrappers>=20150314: found cwrappers-20220403 => Tool dependency checkperms>=1.1: found checkperms-1.12 => Full dependency netcdf>=4.6.1nb16: found netcdf-4.9.2 ===> Overriding tools for netcdf-cxx-4.3.1 ===> Extracting for netcdf-cxx-4.3.1 ===> Patching for netcdf-cxx-4.3.1 ===> Creating toolchain wrappers for netcdf-cxx-4.3.1 ===> Configuring for netcdf-cxx-4.3.1 => Modifying GNU configure scripts to avoid --recheck => Replacing config-guess with pkgsrc versions => Replacing config-sub with pkgsrc versions => Replacing install-sh with pkgsrc version => Checking for portability problems in extracted files configure: netCDF-cxx4 4.3.1 checking build system type... x86_64-redhat-linux-gnu checking host system type... x86_64-redhat-linux-gnu checking target system type... x86_64-redhat-linux-gnu checking for a BSD-compatible install... /bin/install -c -o pbulk -g pbulk checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /home/pbulk/build/devel/netcdf-cxx/work/.tools/bin/mkdir -p checking for gawk... /bin/gawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether to enable maintainer-specific portions of Makefiles... no configure: checking user options checking whether netCDF extra tests should be run (developers only)... no checking whether large file (> 2GB) tests should be run... no checking whether benchmaks should be run (experimental)... no checking where to put large temp files if large file tests are run... . checking for doxygen... no configure: WARNING: Doxygen not found - documentation will not be built checking for dot... no configure: WARNING: dot not found - will use simple charts in documentation configure: finding other utilities configure: setting up libtool checking how to print strings... printf checking whether make supports the include directive... yes (GNU style) checking for x86_64-redhat-linux-gcc... cc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether cc accepts -g... yes checking for cc option to accept ISO C89... none needed checking whether cc understands -c and -o together... yes checking dependency style of cc... gcc3 checking for a sed that does not truncate output... /bin/sed checking for grep that handles long lines and -e... (cached) /bin/grep checking for egrep... (cached) /bin/egrep checking for fgrep... /bin/grep -F checking for ld used by cc... /home/pbulk/build/devel/netcdf-cxx/work/.cwrapper/bin/ld checking if the linker (/home/pbulk/build/devel/netcdf-cxx/work/.cwrapper/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /bin/nm -B checking the name lister (/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... (cached) 2097152 checking how to convert x86_64-redhat-linux-gnu file names to x86_64-redhat-linux-gnu format... func_convert_file_noop checking how to convert x86_64-redhat-linux-gnu file names to toolchain format... func_convert_file_noop checking for /home/pbulk/build/devel/netcdf-cxx/work/.cwrapper/bin/ld option to reload object files... -r checking for x86_64-redhat-linux-objdump... no checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for x86_64-redhat-linux-dlltool... no checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for x86_64-redhat-linux-ar... no checking for ar... ar checking for archiver @FILE support... @ checking for x86_64-redhat-linux-strip... no checking for strip... strip checking for x86_64-redhat-linux-ranlib... no checking for ranlib... ranlib checking command to parse /bin/nm -B output from cc object... ok checking for sysroot... no checking for a working dd... /bin/dd checking how to truncate binary pipes... /bin/dd bs=4096 count=1 checking for x86_64-redhat-linux-mt... no checking for mt... no checking if : is a manifest tool... no checking how to run the C preprocessor... cc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if cc supports -fno-rtti -fno-exceptions... no checking for cc option to produce PIC... -fPIC -DPIC checking if cc PIC flag -fPIC -DPIC works... yes checking if cc static flag -static works... no checking if cc supports -c -o file.o... /bin/rm: cannot remove 'conftest*': No such file or directory yes checking if cc supports -c -o file.o... (cached) yes checking whether the cc linker (/home/pbulk/build/devel/netcdf-cxx/work/.cwrapper/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... /bin/rm: cannot remove 'conftest*': No such file or directory no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking whether we are using the GNU C++ compiler... yes checking whether c++ accepts -g... yes checking dependency style of c++... gcc3 checking how to run the C++ preprocessor... c++ -E checking for ld used by c++... /home/pbulk/build/devel/netcdf-cxx/work/.cwrapper/bin/ld -m elf_x86_64 checking if the linker (/home/pbulk/build/devel/netcdf-cxx/work/.cwrapper/bin/ld -m elf_x86_64) is GNU ld... yes checking whether the c++ linker (/home/pbulk/build/devel/netcdf-cxx/work/.cwrapper/bin/ld -m elf_x86_64) supports shared libraries... yes checking for c++ option to produce PIC... -fPIC -DPIC checking if c++ PIC flag -fPIC -DPIC works... yes checking if c++ static flag -static works... no checking if c++ supports -c -o file.o... /bin/rm: cannot remove 'conftest*': No such file or directory yes checking if c++ supports -c -o file.o... (cached) yes checking whether the c++ linker (/home/pbulk/build/devel/netcdf-cxx/work/.cwrapper/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for gawk... (cached) /bin/gawk checking for x86_64-redhat-linux-gcc... (cached) cc checking whether we are using the GNU C compiler... (cached) yes checking whether cc accepts -g... (cached) yes checking for cc option to accept ISO C89... (cached) none needed checking whether cc understands -c and -o together... (cached) yes checking dependency style of cc... (cached) gcc3 checking how to run the C preprocessor... cc -E checking whether ln -s works... yes checking whether make sets $(MAKE)... (cached) yes checking stddef.h usability... yes checking stddef.h presence... yes checking for stddef.h... yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for stdbool.h that conforms to C99... yes checking for _Bool... yes checking for size_t... yes checking for ptrdiff_t... yes checking for stdlib.h... (cached) yes checking for GNU libc compatible malloc... yes checking for special C compiler options needed for large files... no checking for _FILE_OFFSET_BITS value needed for large files... no checking for nc-config... /usr/pkg/bin/nc-config configure: checking output of nc-config checking for nc_def_var_filter in -lnetcdf... yes checking whether filter testing should be run... yes checking netCDF v2 API present... yes checking netCDF-4 present... yes checking netCDF has logging... no checking netCDF has dap... yes checking netCDF has pnetcdf... no checking netCDF has filter support... yes configure: generating header files and makefiles checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating test_common.sh config.status: creating Makefile config.status: creating cxx4/Makefile config.status: creating examples/Makefile config.status: creating docs/Makefile config.status: creating ncxx4-config config.status: creating netcdf-cxx4.pc config.status: creating cxx4/findplugin.sh config.status: creating plugins/Makefile config.status: creating examples/tst_filter.sh config.status: creating examples/findplugin.sh config.status: creating config.h config.status: executing depfiles commands config.status: executing libtool commands /bin/rm: cannot remove 'libtoolT': No such file or directory => Modifying libtool scripts to use pkgsrc libtool => Modifying libtool scripts to use pkgsrc depcomp