===> Installing for R-RSQLite-2.2.20
=> Generating pre-install file lists
=> Creating installation directories
* installing *source* package 'RSQLite' ...
** package 'RSQLite' successfully unpacked and MD5 sums checked
** using staged installation
Warning in file(con, "r") :
cannot open file '/var/db/timezone/zoneinfo/+VERSION': No such file or directory
Warning in as.POSIXlt.POSIXct(x, tz) :
system timezone name is unknown: set environment variable TZ
** libs
using C compiler: 'Apple clang version 13.1.6 (clang-1316.0.21.2.5)'
using C++ compiler: 'Apple clang version 13.1.6 (clang-1316.0.21.2.5)'
using SDK: ''
clang -I"/opt/pkg/lib/R/include" -DNDEBUG -I. -Ivendor -Ivendor/extensions -Ivendor/sqlite3 -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_ENABLE_STAT4 -DSQLITE_SOUNDEX -DSQLITE_USE_URI=1 -DRCPP_DEFAULT_INCLUDE_CALL=false -DRCPP_USING_UTF8_ERROR_STRING -DBOOST_NO_AUTO_PTR -DSQLITE_MAX_LENGTH=2147483647 -DHAVE_USLEEP=1 -I'/opt/pkg/lib/R/library/plogr/include' -I'/opt/pkg/lib/R/library/Rcpp/include' -DPNG_NO_ASSEMBLER_CODE -I/opt/pkg/include -I/opt/pkg/include/glib-2.0 -I/opt/pkg/include/gio-unix-2.0 -I/opt/pkg/lib/glib-2.0/include -D_REENTRANT -I/opt/pkg/include/freetype2 -I/opt/pkg/include/harfbuzz -I/opt/pkg/include/ncurses -DLDAP_DEPRECATED -fPIC -pipe -Os -I/opt/pkg/include -I/opt/pkg/include/glib-2.0 -I/opt/pkg/include/gio-unix-2.0 -I/opt/pkg/lib/glib-2.0/include -D_REENTRANT -I/opt/pkg/include/freetype2 -I/opt/pkg/include/harfbuzz -I/opt/pkg/include/ncurses -DLDAP_DEPRECATED -c vendor/sqlite3/sqlite3.c -o vendor/sqlite3/sqlite3.o
clang++ -std=gnu++17 -I"/opt/pkg/lib/R/include" -DNDEBUG -I. -Ivendor -Ivendor/extensions -Ivendor/sqlite3 -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_ENABLE_STAT4 -DSQLITE_SOUNDEX -DSQLITE_USE_URI=1 -DRCPP_DEFAULT_INCLUDE_CALL=false -DRCPP_USING_UTF8_ERROR_STRING -DBOOST_NO_AUTO_PTR -DSQLITE_MAX_LENGTH=2147483647 -DHAVE_USLEEP=1 -I'/opt/pkg/lib/R/library/plogr/include' -I'/opt/pkg/lib/R/library/Rcpp/include' -DPNG_NO_ASSEMBLER_CODE -I/opt/pkg/include -I/opt/pkg/include/glib-2.0 -I/opt/pkg/include/gio-unix-2.0 -I/opt/pkg/lib/glib-2.0/include -D_REENTRANT -I/opt/pkg/include/freetype2 -I/opt/pkg/include/harfbuzz -I/opt/pkg/include/ncurses -DLDAP_DEPRECATED -fPIC -pipe -Os -I/opt/pkg/include -I/opt/pkg/include/glib-2.0 -I/opt/pkg/include/gio-unix-2.0 -I/opt/pkg/lib/glib-2.0/include -D_REENTRANT -I/opt/pkg/include/freetype2 -I/opt/pkg/include/harfbuzz -I/opt/pkg/include/ncurses -DLDAP_DEPRECATED -c DbColumn.cpp -o DbColumn.o
In file included from DbColumn.cpp:1:
In file included from ./pch.h:1:
In file included from ./RSQLite.h:14:
In file included from vendor/boost/container/stable_vector.hpp:23:
In file included from vendor/boost/config.hpp:48:
vendor/boost/config/stdlib/libcpp.hpp:98:11: warning: 'BOOST_NO_AUTO_PTR' macro redefined [-Wmacro-redefined]
# define BOOST_NO_AUTO_PTR
^
<command line>:13:9: note: previous definition is here
#define BOOST_NO_AUTO_PTR 1
^
1 warning generated.
clang++ -std=gnu++17 -I"/opt/pkg/lib/R/include" -DNDEBUG -I. -Ivendor -Ivendor/extensions -Ivendor/sqlite3 -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_ENABLE_STAT4 -DSQLITE_SOUNDEX -DSQLITE_USE_URI=1 -DRCPP_DEFAULT_INCLUDE_CALL=false -DRCPP_USING_UTF8_ERROR_STRING -DBOOST_NO_AUTO_PTR -DSQLITE_MAX_LENGTH=2147483647 -DHAVE_USLEEP=1 -I'/opt/pkg/lib/R/library/plogr/include' -I'/opt/pkg/lib/R/library/Rcpp/include' -DPNG_NO_ASSEMBLER_CODE -I/opt/pkg/include -I/opt/pkg/include/glib-2.0 -I/opt/pkg/include/gio-unix-2.0 -I/opt/pkg/lib/glib-2.0/include -D_REENTRANT -I/opt/pkg/include/freetype2 -I/opt/pkg/include/harfbuzz -I/opt/pkg/include/ncurses -DLDAP_DEPRECATED -fPIC -pipe -Os -I/opt/pkg/include -I/opt/pkg/include/glib-2.0 -I/opt/pkg/include/gio-unix-2.0 -I/opt/pkg/lib/glib-2.0/include -D_REENTRANT -I/opt/pkg/include/freetype2 -I/opt/pkg/include/harfbuzz -I/opt/pkg/include/ncurses -DLDAP_DEPRECATED -c DbColumnDataSource.cpp -o DbColumnDataSource.o
In file included from DbColumnDataSource.cpp:1:
In file included from ./pch.h:1:
In file included from ./RSQLite.h:14:
In file included from vendor/boost/container/stable_vector.hpp:23:
In file included from vendor/boost/config.hpp:48:
vendor/boost/config/stdlib/libcpp.hpp:98:11: warning: 'BOOST_NO_AUTO_PTR' macro redefined [-Wmacro-redefined]
# define BOOST_NO_AUTO_PTR
^
<command line>:13:9: note: previous definition is here
#define BOOST_NO_AUTO_PTR 1
^
1 warning generated.
clang++ -std=gnu++17 -I"/opt/pkg/lib/R/include" -DNDEBUG -I. -Ivendor -Ivendor/extensions -Ivendor/sqlite3 -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_ENABLE_STAT4 -DSQLITE_SOUNDEX -DSQLITE_USE_URI=1 -DRCPP_DEFAULT_INCLUDE_CALL=false -DRCPP_USING_UTF8_ERROR_STRING -DBOOST_NO_AUTO_PTR -DSQLITE_MAX_LENGTH=2147483647 -DHAVE_USLEEP=1 -I'/opt/pkg/lib/R/library/plogr/include' -I'/opt/pkg/lib/R/library/Rcpp/include' -DPNG_NO_ASSEMBLER_CODE -I/opt/pkg/include -I/opt/pkg/include/glib-2.0 -I/opt/pkg/include/gio-unix-2.0 -I/opt/pkg/lib/glib-2.0/include -D_REENTRANT -I/opt/pkg/include/freetype2 -I/opt/pkg/include/harfbuzz -I/opt/pkg/include/ncurses -DLDAP_DEPRECATED -fPIC -pipe -Os -I/opt/pkg/include -I/opt/pkg/include/glib-2.0 -I/opt/pkg/include/gio-unix-2.0 -I/opt/pkg/lib/glib-2.0/include -D_REENTRANT -I/opt/pkg/include/freetype2 -I/opt/pkg/include/harfbuzz -I/opt/pkg/include/ncurses -DLDAP_DEPRECATED -c DbColumnDataSourceFactory.cpp -o DbColumnDataSourceFactory.o
In file included from DbColumnDataSourceFactory.cpp:1:
In file included from ./pch.h:1:
In file included from ./RSQLite.h:14:
In file included from vendor/boost/container/stable_vector.hpp:23:
In file included from vendor/boost/config.hpp:48:
vendor/boost/config/stdlib/libcpp.hpp:98:11: warning: 'BOOST_NO_AUTO_PTR' macro redefined [-Wmacro-redefined]
# define BOOST_NO_AUTO_PTR
^
<command line>:13:9: note: previous definition is here
#define BOOST_NO_AUTO_PTR 1
^
1 warning generated.
clang++ -std=gnu++17 -I"/opt/pkg/lib/R/include" -DNDEBUG -I. -Ivendor -Ivendor/extensions -Ivendor/sqlite3 -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_ENABLE_STAT4 -DSQLITE_SOUNDEX -DSQLITE_USE_URI=1 -DRCPP_DEFAULT_INCLUDE_CALL=false -DRCPP_USING_UTF8_ERROR_STRING -DBOOST_NO_AUTO_PTR -DSQLITE_MAX_LENGTH=2147483647 -DHAVE_USLEEP=1 -I'/opt/pkg/lib/R/library/plogr/include' -I'/opt/pkg/lib/R/library/Rcpp/include' -DPNG_NO_ASSEMBLER_CODE -I/opt/pkg/include -I/opt/pkg/include/glib-2.0 -I/opt/pkg/include/gio-unix-2.0 -I/opt/pkg/lib/glib-2.0/include -D_REENTRANT -I/opt/pkg/include/freetype2 -I/opt/pkg/include/harfbuzz -I/opt/pkg/include/ncurses -DLDAP_DEPRECATED -fPIC -pipe -Os -I/opt/pkg/include -I/opt/pkg/include/glib-2.0 -I/opt/pkg/include/gio-unix-2.0 -I/opt/pkg/lib/glib-2.0/include -D_REENTRANT -I/opt/pkg/include/freetype2 -I/opt/pkg/include/harfbuzz -I/opt/pkg/include/ncurses -DLDAP_DEPRECATED -c DbColumnStorage.cpp -o DbColumnStorage.o
In file included from DbColumnStorage.cpp:1:
In file included from ./pch.h:1:
In file included from ./RSQLite.h:14:
In file included from vendor/boost/container/stable_vector.hpp:23:
In file included from vendor/boost/config.hpp:48:
vendor/boost/config/stdlib/libcpp.hpp:98:11: warning: 'BOOST_NO_AUTO_PTR' macro redefined [-Wmacro-redefined]
# define BOOST_NO_AUTO_PTR
^
<command line>:13:9: note: previous definition is here
#define BOOST_NO_AUTO_PTR 1
^
1 warning generated.
clang++ -std=gnu++17 -I"/opt/pkg/lib/R/include" -DNDEBUG -I. -Ivendor -Ivendor/extensions -Ivendor/sqlite3 -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_ENABLE_STAT4 -DSQLITE_SOUNDEX -DSQLITE_USE_URI=1 -DRCPP_DEFAULT_INCLUDE_CALL=false -DRCPP_USING_UTF8_ERROR_STRING -DBOOST_NO_AUTO_PTR -DSQLITE_MAX_LENGTH=2147483647 -DHAVE_USLEEP=1 -I'/opt/pkg/lib/R/library/plogr/include' -I'/opt/pkg/lib/R/library/Rcpp/include' -DPNG_NO_ASSEMBLER_CODE -I/opt/pkg/include -I/opt/pkg/include/glib-2.0 -I/opt/pkg/include/gio-unix-2.0 -I/opt/pkg/lib/glib-2.0/include -D_REENTRANT -I/opt/pkg/include/freetype2 -I/opt/pkg/include/harfbuzz -I/opt/pkg/include/ncurses -DLDAP_DEPRECATED -fPIC -pipe -Os -I/opt/pkg/include -I/opt/pkg/include/glib-2.0 -I/opt/pkg/include/gio-unix-2.0 -I/opt/pkg/lib/glib-2.0/include -D_REENTRANT -I/opt/pkg/include/freetype2 -I/opt/pkg/include/harfbuzz -I/opt/pkg/include/ncurses -DLDAP_DEPRECATED -c DbConnection.cpp -o DbConnection.o
In file included from DbConnection.cpp:1:
In file included from ./pch.h:1:
In file included from ./RSQLite.h:14:
In file included from vendor/boost/container/stable_vector.hpp:23:
In file included from vendor/boost/config.hpp:48:
vendor/boost/config/stdlib/libcpp.hpp:98:11: warning: 'BOOST_NO_AUTO_PTR' macro redefined [-Wmacro-redefined]
# define BOOST_NO_AUTO_PTR
^
<command line>:13:9: note: previous definition is here
#define BOOST_NO_AUTO_PTR 1
^
1 warning generated.
clang++ -std=gnu++17 -I"/opt/pkg/lib/R/include" -DNDEBUG -I. -Ivendor -Ivendor/extensions -Ivendor/sqlite3 -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_ENABLE_STAT4 -DSQLITE_SOUNDEX -DSQLITE_USE_URI=1 -DRCPP_DEFAULT_INCLUDE_CALL=false -DRCPP_USING_UTF8_ERROR_STRING -DBOOST_NO_AUTO_PTR -DSQLITE_MAX_LENGTH=2147483647 -DHAVE_USLEEP=1 -I'/opt/pkg/lib/R/library/plogr/include' -I'/opt/pkg/lib/R/library/Rcpp/include' -DPNG_NO_ASSEMBLER_CODE -I/opt/pkg/include -I/opt/pkg/include/glib-2.0 -I/opt/pkg/include/gio-unix-2.0 -I/opt/pkg/lib/glib-2.0/include -D_REENTRANT -I/opt/pkg/include/freetype2 -I/opt/pkg/include/harfbuzz -I/opt/pkg/include/ncurses -DLDAP_DEPRECATED -fPIC -pipe -Os -I/opt/pkg/include -I/opt/pkg/include/glib-2.0 -I/opt/pkg/include/gio-unix-2.0 -I/opt/pkg/lib/glib-2.0/include -D_REENTRANT -I/opt/pkg/include/freetype2 -I/opt/pkg/include/harfbuzz -I/opt/pkg/include/ncurses -DLDAP_DEPRECATED -c DbDataFrame.cpp -o DbDataFrame.o
In file included from DbDataFrame.cpp:1:
In file included from ./pch.h:1:
In file included from ./RSQLite.h:14:
In file included from vendor/boost/container/stable_vector.hpp:23:
In file included from vendor/boost/config.hpp:48:
vendor/boost/config/stdlib/libcpp.hpp:98:11: warning: 'BOOST_NO_AUTO_PTR' macro redefined [-Wmacro-redefined]
# define BOOST_NO_AUTO_PTR
^
<command line>:13:9: note: previous definition is here
#define BOOST_NO_AUTO_PTR 1
^
In file included from DbDataFrame.cpp:7:
vendor/boost/bind.hpp:36:1: warning: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior. [-W#pragma-messages]
BOOST_PRAGMA_MESSAGE(
^
vendor/boost/config/pragma_message.hpp:24:34: note: expanded from macro 'BOOST_PRAGMA_MESSAGE'
# define BOOST_PRAGMA_MESSAGE(x) _Pragma(BOOST_STRINGIZE(message(x)))
^
<scratch space>:225:2: note: expanded from here
message("The practice of declaring the Bind placeholders (_1, _2, ...) " "in the global namespace is deprecated. Please use " "<boost/bind/bind.hpp> + using namespace boost::placeholders, " "or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.")
^
2 warnings generated.
clang++ -std=gnu++17 -I"/opt/pkg/lib/R/include" -DNDEBUG -I. -Ivendor -Ivendor/extensions -Ivendor/sqlite3 -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_ENABLE_STAT4 -DSQLITE_SOUNDEX -DSQLITE_USE_URI=1 -DRCPP_DEFAULT_INCLUDE_CALL=false -DRCPP_USING_UTF8_ERROR_STRING -DBOOST_NO_AUTO_PTR -DSQLITE_MAX_LENGTH=2147483647 -DHAVE_USLEEP=1 -I'/opt/pkg/lib/R/library/plogr/include' -I'/opt/pkg/lib/R/library/Rcpp/include' -DPNG_NO_ASSEMBLER_CODE -I/opt/pkg/include -I/opt/pkg/include/glib-2.0 -I/opt/pkg/include/gio-unix-2.0 -I/opt/pkg/lib/glib-2.0/include -D_REENTRANT -I/opt/pkg/include/freetype2 -I/opt/pkg/include/harfbuzz -I/opt/pkg/include/ncurses -DLDAP_DEPRECATED -fPIC -pipe -Os -I/opt/pkg/include -I/opt/pkg/include/glib-2.0 -I/opt/pkg/include/gio-unix-2.0 -I/opt/pkg/lib/glib-2.0/include -D_REENTRANT -I/opt/pkg/include/freetype2 -I/opt/pkg/include/harfbuzz -I/opt/pkg/include/ncurses -DLDAP_DEPRECATED -c DbResult.cpp -o DbResult.o
In file included from DbResult.cpp:1:
In file included from ./pch.h:1:
In file included from ./RSQLite.h:14:
In file included from vendor/boost/container/stable_vector.hpp:23:
In file included from vendor/boost/config.hpp:48:
vendor/boost/config/stdlib/libcpp.hpp:98:11: warning: 'BOOST_NO_AUTO_PTR' macro redefined [-Wmacro-redefined]
# define BOOST_NO_AUTO_PTR
^
<command line>:13:9: note: previous definition is here
#define BOOST_NO_AUTO_PTR 1
^
In file included from DbResult.cpp:4:
In file included from ./DbResultImpl.h:1:
./SqliteResultImpl.h:75:8: error: 'noreturn' attribute cannot be applied to types
void NORET raise_sqlite_exception() const;
^
/Users/pbulk/build/databases/R-RSQLite/work/.buildlink/lib/R/include/R_ext/Error.h:42:18: note: expanded from macro 'NORET'
# define NORET [[noreturn]]
^
In file included from DbResult.cpp:4:
In file included from ./DbResultImpl.h:1:
./SqliteResultImpl.h:76:15: error: 'noreturn' attribute cannot be applied to types
static void NORET raise_sqlite_exception(sqlite3* conn);
^
/Users/pbulk/build/databases/R-RSQLite/work/.buildlink/lib/R/include/R_ext/Error.h:42:18: note: expanded from macro 'NORET'
# define NORET [[noreturn]]
^
1 warning and 2 errors generated.
*** Error code 1
Stop.
make: stopped making "all" in /Users/pbulk/build/databases/R-RSQLite/work/RSQLite/src
ERROR: compilation failed for package 'RSQLite'
* removing '/Users/pbulk/build/databases/R-RSQLite/work/.destdir/opt/pkg/lib/R/library/RSQLite'
*** Error code 1
Stop.
bmake[1]: stopped making "stage-install" in /Volumes/data/jenkins/workspace/pkgsrc-macos-trunk-arm64/databases/R-RSQLite
*** Error code 1
Stop.
bmake: stopped making "stage-install" in /Volumes/data/jenkins/workspace/pkgsrc-macos-trunk-arm64/databases/R-RSQLite