=> Bootstrap dependency digest>=20211023: found digest-20220214 ===> Building for cgatools-1.8.0.1 [ 1%] Building CXX object smoketest/CMakeFiles/cgatoolscompileheader.dir/cgatools/cgdata/CnvDetailStore.hpp.cpp.o [ 1%] Building CXX object CMakeFiles/cgatools.dir/cgatools/cgdata/CnvSegmentStore.cpp.o [ 1%] Building CXX object CMakeFiles/cgatools.dir/cgatools/cgdata/CnvDetailStore.cpp.o [ 2%] Building CXX object smoketest/CMakeFiles/cgatoolscompileheader.dir/cgatools/cgdata/CnvSegmentStore.hpp.cpp.o [ 2%] Building CXX object CMakeFiles/cgatools.dir/cgatools/cgdata/Dnb.cpp.o [ 3%] Building CXX object CMakeFiles/cgatools.dir/cgatools/cgdata/EvidenceReader.cpp.o [ 3%] Building CXX object smoketest/CMakeFiles/cgatoolscompileheader.dir/cgatools/cgdata/Dnb.hpp.cpp.o [ 4%] Building CXX object smoketest/CMakeFiles/cgatoolscompileheader.dir/cgatools/cgdata/EvidenceReader.hpp.cpp.o [ 4%] Building CXX object CMakeFiles/cgatools.dir/cgatools/cgdata/GenomeMetadata.cpp.o [ 5%] Building CXX object CMakeFiles/cgatools.dir/cgatools/cgdata/LibraryReader.cpp.o [ 5%] Building CXX object smoketest/CMakeFiles/cgatoolscompileheader.dir/cgatools/cgdata/GenomeMetadata.hpp.cpp.o [ 6%] Building CXX object smoketest/CMakeFiles/cgatoolscompileheader.dir/cgatools/cgdata/LibraryReader.hpp.cpp.o [ 6%] Building CXX object smoketest/CMakeFiles/cgatoolscompileheader.dir/cgatools/cgdata/ReferenceSupportReader.hpp.cpp.o [ 6%] Building CXX object CMakeFiles/cgatools.dir/cgatools/cgdata/ReferenceSupportReader.cpp.o [ 7%] Building CXX object smoketest/CMakeFiles/cgatoolscompileheader.dir/cgatools/command/CallDiff.hpp.cpp.o [ 8%] Building CXX object CMakeFiles/cgatools.dir/cgatools/command/CallDiff.cpp.o [ 9%] Building CXX object CMakeFiles/cgatools.dir/cgatools/command/Command.cpp.o [ 10%] Building CXX object smoketest/CMakeFiles/cgatoolscompileheader.dir/cgatools/command/Command.hpp.cpp.o [ 10%] Building CXX object CMakeFiles/cgatools.dir/cgatools/command/Crr2Fasta.cpp.o [ 10%] Building CXX object smoketest/CMakeFiles/cgatoolscompileheader.dir/cgatools/command/Crr2Fasta.hpp.cpp.o [ 11%] Building CXX object smoketest/CMakeFiles/cgatoolscompileheader.dir/cgatools/command/DecodeCrr.hpp.cpp.o [ 12%] Building CXX object CMakeFiles/cgatools.dir/cgatools/command/DecodeCrr.cpp.o [ 12%] Building CXX object smoketest/CMakeFiles/cgatoolscompileheader.dir/cgatools/command/Evidence2Cache.hpp.cpp.o In file included from /Users/pbulk/build/joyent/cgatools/work/cgatools-1.8.0.1-source/_build/smoketest/cgatools/command/Evidence2Cache.hpp.cpp:15: In file included from /Users/pbulk/build/joyent/cgatools/work/cgatools-1.8.0.1-source/./cgatools/command/Evidence2Cache.hpp:22: /Users/pbulk/build/joyent/cgatools/work/cgatools-1.8.0.1-source/./cgatools/util/RangeSet.hpp:48:35: error: 'std::set >::reference' (aka 'std::pair &') is not a class, namespace, or enumeration bool intersects(const reference::Range& r) const; ^ 1 error generated. --- smoketest/CMakeFiles/cgatoolscompileheader.dir/cgatools/command/Evidence2Cache.hpp.cpp.o --- *** [smoketest/CMakeFiles/cgatoolscompileheader.dir/cgatools/command/Evidence2Cache.hpp.cpp.o] Error code 1 bmake[2]: stopped in /Users/pbulk/build/joyent/cgatools/work/cgatools-1.8.0.1-source/_build 1 error bmake[2]: stopped in /Users/pbulk/build/joyent/cgatools/work/cgatools-1.8.0.1-source/_build --- smoketest/CMakeFiles/cgatoolscompileheader.dir/all --- *** [smoketest/CMakeFiles/cgatoolscompileheader.dir/all] Error code 2 bmake[1]: stopped in /Users/pbulk/build/joyent/cgatools/work/cgatools-1.8.0.1-source/_build A failure has been detected in another branch of the parallel make bmake[2]: stopped in /Users/pbulk/build/joyent/cgatools/work/cgatools-1.8.0.1-source/_build --- CMakeFiles/cgatools.dir/all --- *** [CMakeFiles/cgatools.dir/all] Error code 2 bmake[1]: stopped in /Users/pbulk/build/joyent/cgatools/work/cgatools-1.8.0.1-source/_build 2 errors bmake[1]: stopped in /Users/pbulk/build/joyent/cgatools/work/cgatools-1.8.0.1-source/_build *** [all] Error code 2 bmake: stopped in /Users/pbulk/build/joyent/cgatools/work/cgatools-1.8.0.1-source/_build 1 error bmake: stopped in /Users/pbulk/build/joyent/cgatools/work/cgatools-1.8.0.1-source/_build *** Error code 2 Stop. bmake[1]: stopped in /Volumes/data/jenkins/workspace/pkgsrc-macos11-trunk-arm64/joyent/cgatools *** Error code 1 Stop. bmake: stopped in /Volumes/data/jenkins/workspace/pkgsrc-macos11-trunk-arm64/joyent/cgatools