+ case "${usergroup_phase}" in + local run_cmd + run_cmd=run_su + shift + run_su /opt/local/bin/bmake configure BATCH=1 DEPENDS_TARGET=/nonexistent WRKLOG=/tmp/bulklog/R-igraph-1.2.4.1nb4/work.log + su pbulk -c '"$@"' make /opt/local/bin/bmake configure BATCH=1 DEPENDS_TARGET=/nonexistent WRKLOG=/tmp/bulklog/R-igraph-1.2.4.1nb4/work.log => Bootstrap dependency digest>=20211023: found digest-20211023 => Checksum BLAKE2s OK for R/igraph_1.2.4.1.tar.gz => Checksum SHA512 OK for R/igraph_1.2.4.1.tar.gz ===> Installing dependencies for R-igraph-1.2.4.1nb4 ========================================================================== The following variables will affect the build process of this package, R-igraph-1.2.4.1nb4. Their current value is shown below: * PKGSRC_BLAS_TYPES = netlib openblas openblas_pthread openblas_openmp Based on these variables, the following variables have been set: * BLAS_INCLUDES (not defined) * BLAS_LIBS = -lblas * BLAS_TYPE = netlib * CBLAS_LIBS = -lcblas -lblas * LAPACKE_LIBS = -llapacke -llapack -lblas * LAPACK_LIBS = -llapack -lblas You may want to abort the process now with CTRL-C and change the value of variables in the first group before continuing. Be sure to run `/opt/local/bin/bmake clean' after the changes. ========================================================================== => Tool dependency checkperms>=1.1: found checkperms-1.12 => Build dependency gcc10>=10.3.0: found gcc10-10.3.0 => Build dependency cwrappers>=20150314: found cwrappers-20180325 => Full dependency R-magrittr>=1.5: found R-magrittr-2.0.1 => Full dependency R-pkgconfig>=2.0.0: found R-pkgconfig-2.0.3 => Full dependency R>=4.0.3nb1: found R-4.1.2nb1 => Full dependency libxml2>=2.9.12nb1: found libxml2-2.9.12nb2 => Full dependency gcc10-libs>=10.3.0: found gcc10-libs-10.3.0 ===> Overriding tools for R-igraph-1.2.4.1nb4 ===> Extracting for R-igraph-1.2.4.1nb4 ===> Patching for R-igraph-1.2.4.1nb4 => Applying pkgsrc patches for R-igraph-1.2.4.1nb4 => Verifying /data/jenkins/workspace/pkgsrc-2021Q4-x86_64/math/R-igraph/patches/patch-configure => Applying pkgsrc patch /data/jenkins/workspace/pkgsrc-2021Q4-x86_64/math/R-igraph/patches/patch-configure Hmm... Looks like a unified diff to me... The text leading up to this was: -------------------------- |$NetBSD: patch-configure,v 1.1 2018/05/24 22:25:17 minskim Exp $ | |Portability fix. | |--- configure.orig 2018-03-10 12:30:50.000000000 +0000 |+++ configure -------------------------- Patching file configure using Plan A... Hunk #1 succeeded at 3499. done ===> Creating toolchain wrappers for R-igraph-1.2.4.1nb4 ===> Configuring for R-igraph-1.2.4.1nb4 => Checking for portability problems in extracted files