COPYMAT(1)

NAME
copymat - convert ASCII matrices into a database suitable for quick reading

SYNOPSIS
copymat [-] [-H] [-P filename] [-W N] [-f X] [-r F]

DESCRIPTION
copymat converts ASCII matrices produced by makemat(1) into a database that can be read into memory quickly.

OPTIONS
A summary of options is included below.

-   Print usage message

-H  Print help; overrides all other arguments

-P filename
    Database for matrix profiles (default = stdin)

-W N
    Word size for RPS database (default = 3)

-f X
    Threshold for extending hits for RPS database (default = 11.0)

-r F
    Do not create RPS mem map file(s)

AUTHOR
The National Center for Biotechnology Information.

SEE ALSO
impala(1), makemat(1), impala.html